Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01036 ATGCTATCCTCATCTTTCTCTTCGCTGCGCCACGTCAGATCCCGGCCAACACTCGCTGCCGGAGCCACCACTTCTCCGACGTCGGAGAATCAACAATCATCGAGTCTTTCTCTCCACGCAACAGCGTCGTTTTACGAGATCCTCGGGATCCCCGCCTCCGCGTCGATCCTCGAGATCAAGACTGCGTACCGCCGACTAGCCAGGGTTTGCCATCCCGACGCCGCCACTGTGACTGGCGGTCGGAACGTATCGTCGGACGAGTTCATGAAGATCCATGCTGCTTACTCTACGTTATCGGATCCTGAGAAGCGCTCCAGCTATGATAGGAGCTTGCATCAGCGACGGCGGATTCCACTGACCGCGACGACGCCGGAGTCAAGGTTTCCCGGTTACGGTGGGCGAAGATGGGAAACGGATCAGTGCTGGTAG 429 0.5804 MLSSSFSSLRHVRSRPTLAAGATTSPTSENQQSSSLSLHATASFYEILGIPASASILEIKTAYRRLARVCHPDAATVTGGRNVSSDEFMKIHAAYSTLSDPEKRSSYDRSLHQRRRIPLTATTPESRFPGYGGRRWETDQCW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01036 142 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Arst1g01036 142 Gene3D DnaJ domain 25 120 IPR036869 -
Arst1g01036 142 PRINTS DnaJ domain signature 63 78 IPR001623 -
Arst1g01036 142 PRINTS DnaJ domain signature 83 103 IPR001623 -
Arst1g01036 142 PRINTS DnaJ domain signature 45 63 IPR001623 -
Arst1g01036 142 Pfam DnaJ domain 44 108 IPR001623 -
Arst1g01036 142 SUPERFAMILY Chaperone J-domain 40 114 IPR036869 -
Arst1g01036 142 CDD DnaJ 44 100 IPR001623 -
Arst1g01036 142 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 16 127 - -
Arst1g01036 142 ProSiteProfiles dnaJ domain profile. 43 111 IPR001623 -
Arst1g01036 142 SMART dnaj_3 42 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01036 Arst-Chr1 10347772 10348621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01036 45 113 C2H2 Transcription Factor Family AT1G74250 39.437 2.62e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01036 - - adu:107478883 283.108