Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01028 ATGCCACCAGGACCTCCTGTTGGCCACTGGAATCAATCCAAAAGGAGAGGTTATGAGGAAGATTATCCAATGGACAGAGAATCTAGACGTTTTCAGAGGCCTTATCATGAGCCGTATAATCAGATTGATGCCTACAGAGAAGCCGATATTGACACGTTCCCAGAATATGATAAGTTTCGAGATGGTTATGGCAGCATTGAAAATTATGGGGATCGAGGATATGATAAACCTGCCAGGTTTGGAGGACATGACCGTGATGATTATGCATATGATGACTATGGCTACAAGTCCCGTGCTTCTCATCATCGTAGGGAGGATAGCCATGAGAGGGATTATGATCATGGCCGCCATAGTTATGATTCTGATTATGAAAGAGGCAGTAGAAGAGATAGTAACTGGAGGCGACGTGGATCACGTGATCGAGAACATGATAGAAGAGGTCTTAGTCGGGAAAGAGATGTAAGCCCGCGTAAGAGGCGTGAGCATTCTCATTCTAGGTCCCGGTCCCGTTCCCGGTCCCGGTCCAAATCTCAGTCCCATTCCCAATCCCGTTCCCAGTCTCGTGGATACGACGATCATCCAAGATCAAGGTCCCCTCGAGGTCGAAGCCATAGTCGGAGTTATAGAGAAGATAGCTATAGTGACAGTCGATACGATAGAAGTGAAAGACGCAGGGATCGTGAGGAAAAACGTCAGCGTGAACATTATTCAGTGGCCCCATCTGCAACTATTGTTGTGAAAGGTCTCTCACAGAAAACTACTGAGGAGGATCTGTACCAAATACTTGCGGAGTGGGGACCCCTTCGTCATGTTCGTGTTATAAAGGAAAGAAATTCTGGCATTTCTCGGGGATTTGCATTTATCGATTTTCCTTCTGTGGGAGCCGCACAAGCAATGATGGACAAGCTAGGAGATGATGGTCTTGTTGTGGATGGCAGAAAGCTTTTCTTTGAATATAGTAGTAAACCTACTGGTGGTCCAGGTCCTGATGGAGCTATGAAATCAGGCCATAATCATAAGAGCATTACAATACCATCTGATTGGATGTGCACTATATGTGGCTACATCAATTTTGCACGTCGTACCTCCTGTTATCAGTGTAATGAGCCACGAACTGAGGATGCTCCTGCAGCAGATATTTCATTAACAAATTCATCAGCCATGGGGAAGAAGGGTCTGGAGGCAGGTCCAACTCATGTTTTGGTTGTTCGTGGATTGGATGAAAATGCTGATGAGGAAATGCTCCGCTATGAGTTTTCTAAACATGCTCCAATTAAGGATCTGCGTCTTGTGAGAGACAAGTTTACACATGTCTCAAGGGGATTTGCATTTGTACACTTTTATTCGGTGGAGGATGCTACCAAAGCTCTTGAGGCAACAAATGGGACTACTCTTGAGAAGAATGGACAAATTCTAAGAGTGGCATATGCTAAAAGTATCTTGGGCCCTGGATCAGGAGCACCAGGAACTTCACAATCAAGCAGCCTTGCAGCAGCTGCTATTGAGGCTGCGACATTTGCTCAACAGTATGATTCTGTGGGGTGGGCTCCAAAAGAATACAATCCCGATGATAAGCAAGCTACTGCTCCTGAGCAAAGCACCACAGGTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCCGGTTATTATTATGATGCAGCATCTGGGTTTTACTACGATGGAAATACTGGTCTTTACTACGATGGTAACAATGGGATATGGTATACGTATGACCACCAAACTCAACAGTACATCCCTTGCACTGAACAAAATCAAAACAACACAGCTAATCAGCAGTCTGAACCTTCCAAGGCATCTGATGGTGCCAGTAGTAAAAAGGTGGTAATTTCTGCACCGGCTTCTACTGTTGCATCAGTTGAGAAGCCTGCATCATTGGCAGATGCTGTGCAGGCTGCTGCAACGGCTGCTTTAGCTGCTGAGAAGAAAGAAAAAGAGAAGGCAAAGGAGATAAAACTTGCCTCAAAAAGCAGTATTCTAGCAAACAAGAAAAAAATGAACAATGTGTTGTCAATGTGGAAGCAGAGGAGCCATGAAGGGCAGGCTACTCGAGTAGCCTTGGAGGACAATCAACTCTCTGTTTCCACCGATGATAGGTCATACCCTACAAAGAACAAGTTAAAAGGTGAATCTATGCCTAGGGAAACCAACGTATCTAGCTTGGGAACACATACAACTGTTATCCAGGCTGCTGGTTTGGACTCTCAGGCACAGGCACGGCCTGTTAGTAATAGTCTTGGTGGAACTATTATGGGAGTTATAAGGGGTTCAGGAAGAGGGGTTGTCAAATCAGATAGCTACCCTGGTTCTACAGCTTCTCCGTCATCATTTTCAAGTTCTTCAGCTGCAAGTGTCGATGCACAGATAAGTTCAACTCCTTTTAGAACAGATGTCTCTGCCTTGGGTTCATATACACCATCAGTGGCTGCCGGAAGTGGCAGAAGAAGGTTTTCAGAAGCGCCTAGTTCCGCTTCAATTCATAAGGAGCAACCTCAAACAACCTATAGAGATCGTGCAGCTGAGAGGAGAAGTTTGTATGGCTCATCATCATCGGGTGGGAATGATTTGGCTGATTATGAAATTGGGGATTCAAATCGAGATTTTGTGTCGAGGAAGGGTGATCCTATGCCTTTTCCTCCTGGGGTTGGTGGAGGACGTGCAGTTGGAGAAGTCAACCTTGATACTTTTGAGGTGATAACAGCAGAAAAAGCACTTGATGAAAACAATGTTGGCAATCGTATGCTTCGCAACATGGGATGGCAGGAAGGCTTGGGACTTGGAAAGGATGGGAGTGGAATGGTAGAGCCAGTGCAGGCACAAGCCATGGAGAATAGAGCAGGACTTGGAAGTCAGCAGAAGAAGTTAGATCCTAGCCTTGAGGTGCAGGCAGGGGACAGTTATAAGATGCTTATTCATAAAAAGGCACTTGCCAGGTTCCGGGAAATGAATGACAGTTAA 2982 0.4557 MPPGPPVGHWNQSKRRGYEEDYPMDRESRRFQRPYHEPYNQIDAYREADIDTFPEYDKFRDGYGSIENYGDRGYDKPARFGGHDRDDYAYDDYGYKSRASHHRREDSHERDYDHGRHSYDSDYERGSRRDSNWRRRGSRDREHDRRGLSRERDVSPRKRREHSHSRSRSRSRSRSKSQSHSQSRSQSRGYDDHPRSRSPRGRSHSRSYREDSYSDSRYDRSERRRDREEKRQREHYSVAPSATIVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAAQAMMDKLGDDGLVVDGRKLFFEYSSKPTGGPGPDGAMKSGHNHKSITIPSDWMCTICGYINFARRTSCYQCNEPRTEDAPAADISLTNSSAMGKKGLEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRVAYAKSILGPGSGAPGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDDKQATAPEQSTTGGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYTYDHQTQQYIPCTEQNQNNTANQQSEPSKASDGASSKKVVISAPASTVASVEKPASLADAVQAAATAALAAEKKEKEKAKEIKLASKSSILANKKKMNNVLSMWKQRSHEGQATRVALEDNQLSVSTDDRSYPTKNKLKGESMPRETNVSSLGTHTTVIQAAGLDSQAQARPVSNSLGGTIMGVIRGSGRGVVKSDSYPGSTASPSSFSSSSAASVDAQISSTPFRTDVSALGSYTPSVAAGSGRRRFSEAPSSASIHKEQPQTTYRDRAAERRSLYGSSSSGGNDLADYEIGDSNRDFVSRKGDPMPFPPGVGGGRAVGEVNLDTFEVITAEKALDENNVGNRMLRNMGWQEGLGLGKDGSGMVEPVQAQAMENRAGLGSQQKKLDPSLEVQAGDSYKMLIHKKALARFREMNDS 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01028 993 MobiDBLite consensus disorder prediction 769 790 - -
Arst1g01028 993 Pfam OCRE domain 540 588 IPR041591 -
Arst1g01028 993 PANTHER RNA-BINDING PROTEIN 141 988 - -
Arst1g01028 993 CDD OCRE_SUA_like 536 589 IPR035623 -
Arst1g01028 993 CDD RRM1_RRM2_RBM5_like 397 477 - -
Arst1g01028 993 SUPERFAMILY RNA-binding domain, RBD 397 483 IPR035979 GO:0003676
Arst1g01028 993 MobiDBLite consensus disorder prediction 1 236 - -
Arst1g01028 993 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 242 322 IPR000504 GO:0003723
Arst1g01028 993 MobiDBLite consensus disorder prediction 595 609 - -
Arst1g01028 993 MobiDBLite consensus disorder prediction 595 614 - -
Arst1g01028 993 SUPERFAMILY Ran binding protein zinc finger-like 339 374 IPR036443 -
Arst1g01028 993 MobiDBLite consensus disorder prediction 72 160 - -
Arst1g01028 993 MobiDBLite consensus disorder prediction 526 540 - -
Arst1g01028 993 ProSiteProfiles G-patch domain profile. 915 961 IPR000467 GO:0003676
Arst1g01028 993 Gene3D - 343 374 - -
Arst1g01028 993 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 244 304 IPR000504 GO:0003723
Arst1g01028 993 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 401 467 IPR000504 GO:0003723
Arst1g01028 993 SMART zf_4 346 370 IPR001876 -
Arst1g01028 993 MobiDBLite consensus disorder prediction 186 236 - -
Arst1g01028 993 Gene3D - 380 504 IPR012677 -
Arst1g01028 993 MobiDBLite consensus disorder prediction 772 790 - -
Arst1g01028 993 MobiDBLite consensus disorder prediction 811 846 - -
Arst1g01028 993 SMART G-patch_5 913 959 IPR000467 GO:0003676
Arst1g01028 993 MobiDBLite consensus disorder prediction 515 541 - -
Arst1g01028 993 MobiDBLite consensus disorder prediction 161 177 - -
Arst1g01028 993 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 399 479 IPR000504 GO:0003723
Arst1g01028 993 MobiDBLite consensus disorder prediction 13 65 - -
Arst1g01028 993 Pfam G-patch domain 916 957 IPR000467 GO:0003676
Arst1g01028 993 SUPERFAMILY RNA-binding domain, RBD 227 326 IPR035979 GO:0003676
Arst1g01028 993 ProSitePatterns Zinc finger RanBP2-type signature. 348 367 IPR001876 -
Arst1g01028 993 SMART rrm1_1 400 475 IPR000504 GO:0003723
Arst1g01028 993 SMART rrm1_1 243 318 IPR000504 GO:0003723
Arst1g01028 993 MobiDBLite consensus disorder prediction 699 727 - -
Arst1g01028 993 ProSiteProfiles Zinc finger RanBP2 type profile. 344 373 IPR001876 -
Arst1g01028 993 Gene3D - 206 342 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01028 Arst-Chr1 10306438 10314256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01028 241 463 Eukaryotic Initiation Factors Gene Family AT2G36660 25.200 5.93e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01028 K13094 - gmx:100787998 1509.2