LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g01022	ATGGATGAGGCTAGGCCTCGGAATAATGAAACTGCTGCATCATCATCATCGCCTTCAGCTTCGCGGTTGCCGGTGTCTTCCGGATGGCGTCCGAGCCGGGCTGTGTTTGCTCCTTATGGGCCACCACAGGGTGAAGAAGCCACAGCTCAAAGGCCACAGAGATTGAGAGTGGCAGTGACAGTGAGGAAGCCTTTGGTGGCAAGATTGACCAAGGAAATAGTTGAAACATATCAAACATGCAATCCAAAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGTCCATCAATTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATTCTGACAGTGAATTTTGTCTTGGTCCATGTAGAGAAAAATAAAAGATATATTGTCAAAGATCTTCTTGGCCATGGGACATTTGGTCAAGTGGCGAAGTGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCACTGGTTGAAGTAACTATATTAACGACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCATATTGTTCGTATATATGATTATTTTGTGTATCAACGGCATTTGTGCATATGCTTTGAACTACTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGAGGATTATCACTTAGCATTGTTCAGCTATTCTCTAAGCAGATTTTATGTGGACTGGCTCTATTAAAGGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACAAGCACTGTGAAGCCAGCAGAAATCAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCCTATATTCAGAGTCGATATTACAGATCCCCTGAGGTTCTTCTTGGATATCAGTACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTTCCCGGGGCTTCAGAATTTGATCTTTTGAGGCGGATGATAGAGATTTTGTGAATATATTGCAGAGGACAGCCACCTGATTATGTATTGAGGGAGGCAAAAAACACAAGTAAATTCTTCAAGTGTATTGGAAGTCTCCAGAGCATAGAGATTAGTGAGGGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACAGAGGAAGAGTATGAAGTTAGAGAATTGAAGAAGCCAACCGTTGGAAAGGAGTATTTTAATCATATGAACCTTGAAGCAATTGTTACAAACTATCCCTATAGGAAAAACCTGCCCAAGGAAGATATTGTCAAAGAAAGTCAAATAAGATTGGCTCTTATTGATTTTTTGAGAGGACTTGTTGAGTTCGATCCTGCGAAACGATGGTCACCTTTCCAGGCCTCAAAACACCCTTTTGTAACTGGAGAGCCTTTTACACAACCTTATCAGCCTCCCCCAGAGACTCCTCGTGTGCCGGTTGTTCAAACTGTCAAGGTGGATAATCATCCAGGTGGAGGGCACTGGTTTGCTGCTGGCCTGTCACCTAATGTTCCAGGAAAAAATAGAGCTTCGATCTATAGCAACGCACATTTTCAGATGATGCAGTATCCTCCTTCTAATAGTTATGGTAGCGTAGGAAGCCATGGGAGCTATAATGAGAGCATTGGGCTTGGTAGCAGCTATGGAAGTTATGGAGACAATAGTAACATGTTTCCTTACTATTCACCGGTTGGTCCATCTGGTATGAACATGCATAACCCCAGCCCCTCTCAGTTCACTCCACCTAGTTCCTATGGTCAAGTTGGTTCTCCCGGACACTACGGACCTACATCTCCAGCGAGAGGAACCACTCATGGATCACCTTTGGGGAAGACACCTGCAGTTAGCCAATTTAATCGACGGAAAAACTGGGGATATTCGGGAAGTCCTCAACCTCAAGAAACAGTATTTTCTTCACATTGGCAAGGACAAGGTCCTGACAACTCAAGCCTTCCCGAGGGAACATCCCAAGCCCTTGGCAGCTCCCCATCTTACGTGCAGTCAAATATGAATCCTGGAACCTGGAAGCAGCGAGGAAGTGGAGGGTTATCTTCGAATTTGGCAGTGCAGTCAACAGAGTTGGCTCATGACAATGCAGACTCAGGCATGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGATGATGGTGCAGATGAAAGTTCCTTGACAAATGATTTTTCTAGAAGCATGAGTCTTGGTTCCACGGAACCATGGGTTGGATTGGGAAGGTTGAACCACGGAACCAGTACAAGCTCTCCAATGATCGTACAGAGAATACCCGCATCAGGTCAAGCATTTTCTGGTGAGATGGGTAGCTCTCCAATGCATCATGATCTTCAATATATGTCAAAGCCTTTTCATTATATACCTCATGTTTTACAAAATTCTCCAAGCCGATTCGGTCACCAACCTACTCAAAGGTTTCCACATGGTAGACCTCCCCAGAGCGGCGACTGGAATCAACTTAAGGTTGCACCTCCTCCTCCTAGTTTCGGTAGTGTAGGCCAACGCTCTCCCAGGAATAGCTCATTCTCCAACAACATGACATGGGGGCGAAGAATGAATCCTCCGGTTTCAAGCATGCCGCCAACATCTCGCGCAAGAAAAGATTATGCAAGGATTGACTAA	2706	0.432	MDEARPRNNETAASSSSPSASRLPVSSGWRPSRAVFAPYGPPQGEEATAQRPQRLRVAVTVRKPLVARLTKEIVETYQTCNPKFKYSEDLNPKRFLTSPSIGVLNDGYDNVNSDLILTVNFVLVHVEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILXIYCRGQPPDYVLREAKNTSKFFKCIGSLQSIEISEGSKNGRSVYQALTEEEYEVRELKKPTVGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTQPYQPPPETPRVPVVQTVKVDNHPGGGHWFAAGLSPNVPGKNRASIYSNAHFQMMQYPPSNSYGSVGSHGSYNESIGLGSSYGSYGDNSNMFPYYSPVGPSGMNMHNPSPSQFTPPSSYGQVGSPGHYGPTSPARGTTHGSPLGKTPAVSQFNRRKNWGYSGSPQPQETVFSSHWQGQGPDNSSLPEGTSQALGSSPSYVQSNMNPGTWKQRGSGGLSSNLAVQSTELAHDNADSGMPDPGDWDPNYSDELLLQDDGADESSLTNDFSRSMSLGSTEPWVGLGRLNHGTSTSSPMIVQRIPASGQAFSGEMGSSPMHHDLQYMSKPFHYIPHVLQNSPSRFGHQPTQRFPHGRPPQSGDWNQLKVAPPPPSFGSVGQRSPRNSSFSNNMTWGRRMNPPVSSMPPTSRARKDYARID	901

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g01022	901	FunFam	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	95	211	-	-
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	619	716	-	-
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	860	888	-	-
	Arst1g01022	901	SMART	serkin_6	132	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g01022	901	CDD	PKc_YAK1	132	479	-	-
	Arst1g01022	901	Gene3D	Phosphorylase Kinase; domain 1	97	212	-	-
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	587	610	-	-
	Arst1g01022	901	Gene3D	Transferase(Phosphotransferase) domain 1	213	480	-	-
	Arst1g01022	901	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	255	267	IPR008271	GO:0004672\|GO:0006468
	Arst1g01022	901	ProSiteProfiles	Protein kinase domain profile.	132	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g01022	901	ProSitePatterns	Protein kinases ATP-binding region signature.	138	161	IPR017441	GO:0005524
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	818	901	-	-
	Arst1g01022	901	Pfam	Protein kinase domain	133	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	8	26	-	-
	Arst1g01022	901	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	13	482	-	-
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	584	735	-	-
	Arst1g01022	901	MobiDBLite	consensus disorder prediction	1	50	-	-
	Arst1g01022	901	SUPERFAMILY	Protein kinase-like (PK-like)	125	503	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g01022	Arst-Chr1	10264245	10273319	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g01022	138	351	MAP Kinase Gene Family	AT3G45640	37.391	4.73e-30	121

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-YAK	Arst1g01022		Pkinase	2.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g01022	K18670		-	gmx:100792777	1466.83