Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00987 ATGGATTCTCTTCTCTCACTCCAAACCCCAAGCAACAACCCACACCCTCATTCACCACCGTTACAACCAACACAAACGCCGTTACTAGTTCCAAAACCAGAGCCTCTCGACGATTTCTTCTTTTCTAATAATTCCCAACAATACCCTCACTGGTTCCCTCACCAACAACAACCACAACCTAACAACAACGAGTTTGAGTTACACGCGCCACCATTCGCGTCTGGTTCTCCAGAAGAACATGAAGACTCCGAGCTCTACAACCACTTCTTCCGAGTCTCTCAGCTCTTCCGTACAGCTTTCTCTGATACTCTCTTCCAAAACGACGCCGTTCCGGAACCCATGACGCCACAATCACAGTCACAGTCGCAGCCGAATTTTCAGGATTCTTTTTCCTATGCTTCTGCTTCTAATTCCCAACCTGAGGCTGAGGCTGAAGCTGAAGCTGAGGCAACGCCCGAAGCGGATTCACGCGCCTTGGTTCCCGTTCCGCCATCTTCGTCGTTGACCGTCGCGGCTCCTTCGAAGCGCGTGAGCAAGAAGAAGGAGCTAGTGAGAGTCTCCGAACTCAGCCTTCACGAGCAGCTTCATTTCCGTGAGGTCGTGAGGCGAACAAGAATGATCTACGACTCGATCCGCGCTCTCTGCACCATCGAGGAAGAGAAGCGCGTCCAGGAGGAGAAAAGAGCTGCCGAGAAGAGAGCTGCCGCCGCCGAGGAGGAGAGGAGAGCTGCCGCTGCCGCCGCCACCGTCGCTGACGCTGTTACTATTGCCGCCGATGAACCGTTCGCTGGATCTGAATCCACCGTTGAATGTTCTTCCTCAGCTGAAACCACCGTCTCTGTTGCCGTGCCAGCTCCTGAATCCGCCGGGGAACAACAATCGGCGACTGACAATGGCGCCGGCTATAACCAGACGGAAACAGTCAACAGGGGCGAAGCTGATGCGAAGATGGCGCGGCGGATGCGGCAAAGAGGGGATATTCGTGCGGCGCAGATGATGAGGATGAAGGATCTTTGGTTGAACCGCGATAAGCGAATCGTCGGAGCGATTCCCGGTGTGTATGTTGGCGACGTGTTCCTCTTTCGGATGGAATTGTGTTTCCTTGGATTGCACGGTCAGATCCAGGCTGGCATTGATTACCTGGCAGCTTCCATGAGCCCCAACAATGAGCCAATTGCAACGAGTGTTATTGTCTCCGGTGGCTACGAGGATGATATGGACGAAGGAGATGTCATAATCTACACTGGACAAGGCGGGCAGGCCATGAATTCCGTGAGGCAAGCCACACACCAGAAGTTGGAGAGTGGGAACCTGGCATTGGAGAGGAGTATGTATCATAATATTGAGGTTAGAGTGATTAGAGGGATGAAGTATGAGGGAGCCGCTGCGAAATCCGGTAAGATTTATGTCTATGATGGTTTATATAGGATATCCGAGTGCTGGTTTGATGTTGGAAAGTCCGGTTTTGGTGTTTATAAGTATAAGCTTGTTAGGGTTGAAGGGCAGCCTAAGATGGGTAGTGCTATTCTTAAAGAAGCTAGGAGTATTAGGAAAAGTGGAGTGGATTTTCAACCAATGTATTGTCTTTCTGTTGATATTTCCAATAAGAAGGAGAAGGTTGCGGTTCGGCTCTTTAATGACATTGATGATAGTAAGGAGCCGCTTTGTTTTGATTATCTTCCGACAACTGTTTTCCCTCCATTTGTGTTTCATCAGAGCGGGACTGCTACTGGGTGTGATTGTATCGACGGTTGTACGGATGGATGCTTTTGCAGTATGAAGAATGGAGGCGATTTTCCTTATAATCAGCAGGGGATCCTTGTGAGGGGGAAGCCTTTGATTTTTGAGTGTGGCCCTTTTTGCAGTTGTCCACCTCAATGTAGGAACCGTGTGTCACAGAATGGGGTGAAGAACAGGTTGGAGGTTTTTAGGTCGAAGCAGACAGGTTGGGGAGTAAGGTCCTTGGACCTTATTCAAGCTGGTGCTTTTATCTGTGAGTATGCAGGGGTTGTTTTGACTAGGGAGCAAGCACAGCTTTTGACGATGAATGGTGACTCGTTGATATATCCTAATCGGTTTTCTGAAAGGTGGGCAGAATGGGGTGATTTGTCTCAGGTAAACTCGGACTATGTGCGTCCATCTTATCCGTCAATTCCTCCTTTGGATTTTTCTCTGGATGTGTCAACAGTCCGAAACGTTGCTTGCTATATGAGCCATAGTTCAAGTCCAAATGTTATGGTTCAATTTGTTCTGTATGATCACAACAATTTGATGTTCCCTCACCTTATGCTGTTTGCAATGGAGAATATCCCTCCACTGAGAGAGCTCAGCCTTGATTATGGGGTAGCTGATGAGTGGACAGGCAAGCTCTCCATATGTAATGGGTGA 2388 0.492 MDSLLSLQTPSNNPHPHSPPLQPTQTPLLVPKPEPLDDFFFSNNSQQYPHWFPHQQQPQPNNNEFELHAPPFASGSPEEHEDSELYNHFFRVSQLFRTAFSDTLFQNDAVPEPMTPQSQSQSQPNFQDSFSYASASNSQPEAEAEAEAEATPEADSRALVPVPPSSSLTVAAPSKRVSKKKELVRVSELSLHEQLHFREVVRRTRMIYDSIRALCTIEEEKRVQEEKRAAEKRAAAAEEERRAAAAAATVADAVTIAADEPFAGSESTVECSSSAETTVSVAVPAPESAGEQQSATDNGAGYNQTETVNRGEADAKMARRMRQRGDIRAAQMMRMKDLWLNRDKRIVGAIPGVYVGDVFLFRMELCFLGLHGQIQAGIDYLAASMSPNNEPIATSVIVSGGYEDDMDEGDVIIYTGQGGQAMNSVRQATHQKLESGNLALERSMYHNIEVRVIRGMKYEGAAAKSGKIYVYDGLYRISECWFDVGKSGFGVYKYKLVRVEGQPKMGSAILKEARSIRKSGVDFQPMYCLSVDISNKKEKVAVRLFNDIDDSKEPLCFDYLPTTVFPPFVFHQSGTATGCDCIDGCTDGCFCSMKNGGDFPYNQQGILVRGKPLIFECGPFCSCPPQCRNRVSQNGVKNRLEVFRSKQTGWGVRSLDLIQAGAFICEYAGVVLTREQAQLLTMNGDSLIYPNRFSERWAEWGDLSQVNSDYVRPSYPSIPPLDFSLDVSTVRNVACYMSHSSSPNVMVQFVLYDHNNLMFPHLMLFAMENIPPLRELSLDYGVADEWTGKLSICNG 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00987 795 ProSiteProfiles Pre-SET domain profile. 577 635 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst1g00987 795 MobiDBLite consensus disorder prediction 108 141 - -
Arst1g00987 795 ProSiteProfiles SET domain profile. 638 781 IPR001214 GO:0005515
Arst1g00987 795 Pfam SET domain 649 781 IPR001214 GO:0005515
Arst1g00987 795 SMART preset_2 530 622 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst1g00987 795 SMART set_7 638 787 IPR001214 GO:0005515
Arst1g00987 795 Pfam SAD/SRA domain 347 502 IPR003105 -
Arst1g00987 795 MobiDBLite consensus disorder prediction 108 174 - -
Arst1g00987 795 Gene3D - 345 506 IPR036987 -
Arst1g00987 795 Coils Coil 220 247 - -
Arst1g00987 795 MobiDBLite consensus disorder prediction 285 310 - -
Arst1g00987 795 Pfam Pre-SET motif 533 630 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst1g00987 795 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 106 795 IPR025794 GO:0016571
Arst1g00987 795 MobiDBLite consensus disorder prediction 285 318 - -
Arst1g00987 795 MobiDBLite consensus disorder prediction 39 64 - -
Arst1g00987 795 ProSiteProfiles YDG domain profile. 348 498 IPR003105 -
Arst1g00987 795 SUPERFAMILY PUA domain-like 330 512 IPR015947 -
Arst1g00987 795 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 121 782 - -
Arst1g00987 795 Gene3D SET domain 507 794 IPR046341 -
Arst1g00987 795 MobiDBLite consensus disorder prediction 1 80 - -
Arst1g00987 795 MobiDBLite consensus disorder prediction 13 30 - -
Arst1g00987 795 SMART G9a_1 343 502 IPR003105 -
Arst1g00987 795 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 329 515 - -
Arst1g00987 795 SUPERFAMILY SET domain 523 793 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00987 Arst-Chr1 9855497 9860889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00987 314 783 Su(var)3-9 homologs AT5G04940 42.857 3.18e-108 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst1g00987 SAD_SRA 6.3e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00987 K11420 - aip:107626851 1387.47