LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g00981	ATGGCATCTAAGACGCTTCTTCCGATATCTATGAAGAACAAGAGGGGTGCAATTGCTTTGGATCATTCACCTCCATTTTCCATTTCTTCAATTCCAAGTCGCACTCATTCTTCTCCTTATTCTTCTTCTTCTTCTTCATCTGTTAATGCAACGACAATAATGGTGGTGAAAGGAATTGAAACCGATGACGCTTCTGCAAGGCTCCTTCAACGTTCTTCATCAGCATCTTCTTCTTCTTCTTTAGATGACGTCACCAACGTAAAGACCGTTATGCCCTCCAAGCCAAACATTCCAAAGGCGTCGAGCTTCAACAACGGTGGTCAGAAGAGGAGAAGGCGCAATGCGAGTGAGGATTCGTTTCCTTCGATCTCCGATGGTGGTGGTGGTGGCAATGGGAAGGGAAATGGAAATGAAATCAGAACCGTCGATGGTGATCGTCGCGGTGGTGGTGGTGGTGGTAGAAAGTTTTCGTCTTCTTCAATTGGTGAGGAAGTTAGGCATGTTGCATCTGAAACATTTCTATTGACAAGGCTTTTCTTGACGATGCTGGCATATCTTGGGATAGGCTACAAATGGATCATACAATTCCTTGCACTTGGTTGTTATGCAGTTATGATTTTCCCAGGAGTTATTCAAGTTGGTTATTACTATTTCTGATAAGTGATGTAAGTTTTATTAATTATTTTTATTATCTTTTACAGGCTTGACTTGTATTTACCAAAAAATAGCAATGGTCCAAAACCAGTTGTCGCATTTATTACTGGTGGAGCCTGGATTATTGGCTACAAAGCATGGGGTTCTCTTCTAGGAAAACAGTTATCAGAGAGAGATATCATTGTGGCATGCATTGATTACAGAAATTTTCCTCAGGGAACCATGAGCGATATGCTAGCTGATGCTTCCGAAGGAATCTCATTTGTGTGCAATCACATTGCAGAATATGGTGGTGACCCTAACAGAATTTACCTAATGGGGCAGTCAGCTGGGGCGCATATTGCCGCATGTGCGATTGTGGAGCAGGCAATCAAAGAGGCTGCCAAAGAAGAGGGTATTTCCTGGAGTCTTTCTCGGATTAAGGCTTATTTTGGATTGTCCGGCGGGTATAATGTTTTTAATCTGGTAGATCATTTCCATAACAGAGGTCTTTATCGATCCATATTTTTAAGCATAATGGAAGGAGAGGAAGGCCTACGACGCTTTTCACCAGAAGTAATGGTTCAAGATCCAAACATGGCAAATGCTGTTTCTCTGCTACCTCCTATTGTTCTTTTTCATGGCACTGGAGATTATTCGATTCCATCAGATGCTAGTACATCATTTGCTGAAACTCTTAAAAAACTTGGAGTCAAAGCTGAAGCAATTCTCTATGAAGGGAAGACTCATACAGATGTGTTTCTTCAGGATCCGATGAGAGGTGGCACGGATGCCATGTTCGAAGATCTTGTCAGCTACATTCATGCTAACGATCCTGATGCACGCGCCAAAGATGCCTTGGCTCCTCCAAGGAGACGCCTCGTACCTGAATTCATGTTGAAATTGGCTCATATTGTTAGTCCTTTCTAG	1563	0.4255	MASKTLLPISMKNKRGAIALDHSPPFSISSIPSRTHSSPYSSSSSSSVNATTIMVVKGIETDDASARLLQRSSSASSSSSLDDVTNVKTVMPSKPNIPKASSFNNGGQKRRRRNASEDSFPSISDGGGGGNGKGNGNEIRTVDGDRRGGGGGGRKFSSSSIGEEVRHVASETFLLTRLFLTMLAYLGIGYKWIIQFLALGCYAVMIFPGVIQVGYYYFXXVMXVLLIIFIIFYRLDLYLPKNSNGPKPVVAFITGGAWIIGYKAWGSLLGKQLSERDIIVACIDYRNFPQGTMSDMLADASEGISFVCNHIAEYGGDPNRIYLMGQSAGAHIAACAIVEQAIKEAAKEEGISWSLSRIKAYFGLSGGYNVFNLVDHFHNRGLYRSIFLSIMEGEEGLRRFSPEVMVQDPNMANAVSLLPPIVLFHGTGDYSIPSDASTSFAETLKKLGVKAEAILYEGKTHTDVFLQDPMRGGTDAMFEDLVSYIHANDPDARAKDALAPPRRRLVPEFMLKLAHIVSPF	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g00981	520	PANTHER	AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C	160	479	-	-
	Arst1g00981	520	SUPERFAMILY	alpha/beta-Hydrolases	213	490	IPR029058	-
	Arst1g00981	520	Gene3D	alpha/beta hydrolase	233	470	IPR029058	-
	Arst1g00981	520	MobiDBLite	consensus disorder prediction	76	158	-	-
	Arst1g00981	520	MobiDBLite	consensus disorder prediction	76	109	-	-
	Arst1g00981	520	MobiDBLite	consensus disorder prediction	20	46	-	-
	Arst1g00981	520	MobiDBLite	consensus disorder prediction	26	46	-	-
	Arst1g00981	520	FunFam	Isoprenylcysteine alpha-carbonyl methylesterase ICME	231	469	-	-
	Arst1g00981	520	Pfam	BD-FAE	235	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g00981	Arst-Chr1	9830125	9834937	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g00981	29	520	Carbohydrate Esterase	AT1G26120	59.020	0.0	561

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g00981	K15889		-	gmx:100790850	590.112