Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00954 ATGGCTGAAGATACTTTGGATCTTGATTTGCCTCATAGAAGTGCTGGCCTTTTAAGAGATCGAGTTCATTTGGTTAAAAGGAAAGACTTAGATCGTTATGAGATTGGGGCGATCCAAGATCAGTTATCATTCGAGAAAGGATTCTTTATAGTAATCCGCGCGTGCAAGATGTTGGCGCAGAAGAATGATGGAATGATATTGGTAGGTGTGGCAGGTCCTTCAGGAGCAGGGAAGACTATGTTAACAGAAAAGATCCTAAACTTCATGCCAAGCATTGCAGTAATTTCCATGGACAATTACAATGATGCTAGTAGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACGGATTATGAAACATTGCTCCCAAATTTACATGATTTAAAGGCAGGAAAGGCAGTCCAGGTTCCTATATATGATTTTAAATCGAGTTCACGAACAGGATACAGAACTGTTGATGTTCCAAGCTCCCGAATTGTGATCATAGAGGGAATCTATGCCTTGAATGAGAAGTTACGGCCGCTATTAGACCTTCGAGTATCTGTCACCGGTGGAGTACACCTTGACCTTGTTAAAAGAGTTATACGCGACATACAACGAGCCGGACAAGAACCTGAAGAAATCATTCACCAAATATCAGAAACTGTATATCCAATGTACAAAGCATTTATTGAGCCAGATCTTCAAACTGCACACATCAAAATCATTAACAAGTTCAATCCATTCACCGCATTCCAAAGTCCTACCTACATATTAAAGTCAGCAAGGAGTGTAATAGTGGAACAAGTTAAAGATGTGATCTCCAAAGATTTTCGCGAAACAAAGGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAGAGTTGCCAATCCTATTTACGAATGCGAAATACAGATGGAAAATATGTTCTTATGTTCGAGGAATGGGTGACAGATGATCCATTTGTGATATCCCCGAGAATCACTTTTTCGGTCAGTGTTCGTCTCCTCGGCGGACTAATGGCGTTGGGATACACAATAGCAACCATCCTTAAAAGAAACAGCCATATCTTTTGTGATGATAGTGTTTGTGTTAAACTAGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACTTGGAAGAGATCGTTTACTTGTAATTAACAAAGCGCAGCAGTTGGGTCTAGAAGGTTCCTACATTCCTCGAACCTACATAGAACAGATTCAACATGAAAAGCTTGGAAAAGAAGTTATGGCCCTGCCGGAAGATTTAAAGACGACGTTGAGCCTCGACGACGACTTTGCGTCGAGCCCGAAAGAATTTGCTGACCAGGTTTCCATGACCATGAGACATAAGCAAATAGGTTTGTCTAGATCATTTACAAATCTAAGAGACAAGAATCAAGCCAAACTTGGAGGTTATGTCTCCAACAATAGAGATCTTCATGAAAGAAATGATTCGGATGAATCCAAAACAATGGCAAATGAGGGAGCCATAACTCAACTTTTGGAAAGAATTTCTTGCTTATATGATAGAATGGATGATTTTACAAACTACATTGAAGAGATGAACTTCAAGTTATCTCTGAAGAAAATTTGTCAATGCCAACAAAATATGCACCTACAAGTTGGTTCATGCAATGGTTGTTCTTCCACCTCTTACTTCATCACTAGCTTGAGCAACGGTTCCTCCGTCGTGTCGCCACCACCAACTAAGGAGTTTATCTTAATGGATGAGATATCAGGTATTGTAAGGGGTCAGCATCAAATCATGCATCAATTGGACAATCTTAATAAACTACTTGTGGGGAAAATGGAAGAAAGGACTCACCAAACAAGCCCCATGAAGAAAGGTGCACTAATAAGTGCTACAACACATTCAGATTCAACTGGACCACAAGTTATGGGTTTGGCTTTTGGTTGTTTGGGAATATTCTTTGTGATGGGTATTTTTTATAGATTGAGGTAG 1968 0.3979 MAEDTLDLDLPHRSAGLLRDRVHLVKRKDLDRYEIGAIQDQLSFEKGFFIVIRACKMLAQKNDGMILVGVAGPSGAGKTMLTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYETLLPNLHDLKAGKAVQVPIYDFKSSSRTGYRTVDVPSSRIVIIEGIYALNEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTAFQSPTYILKSARSVIVEQVKDVISKDFRETKEQTYDIYLLPPGEDPESCQSYLRMRNTDGKYVLMFEEWVTDDPFVISPRITFSVSVRLLGGLMALGYTIATILKRNSHIFCDDSVCVKLDWLEQLNRHYVQVLGRDRLLVINKAQQLGLEGSYIPRTYIEQIQHEKLGKEVMALPEDLKTTLSLDDDFASSPKEFADQVSMTMRHKQIGLSRSFTNLRDKNQAKLGGYVSNNRDLHERNDSDESKTMANEGAITQLLERISCLYDRMDDFTNYIEEMNFKLSLKKICQCQQNMHLQVGSCNGCSSTSYFITSLSNGSSVVSPPPTKEFILMDEISGIVRGQHQIMHQLDNLNKLLVGKMEERTHQTSPMKKGALISATTHSDSTGPQVMGLAFGCLGIFFVMGIFYRLR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00954 655 PRINTS Uridine kinase signature 188 198 - -
Arst1g00954 655 PRINTS Uridine kinase signature 65 82 - -
Arst1g00954 655 PRINTS Uridine kinase signature 132 147 - -
Arst1g00954 655 PRINTS Uridine kinase signature 224 237 - -
Arst1g00954 655 PANTHER URIDINE KINASE 43 423 - -
Arst1g00954 655 Gene3D - 65 271 IPR027417 -
Arst1g00954 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 236 IPR027417 -
Arst1g00954 655 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Arst1g00954 655 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
Arst1g00954 655 CDD UMPK_like 67 239 - -
Arst1g00954 655 SUPERFAMILY CYTH-like phosphatases 276 407 IPR033469 -
Arst1g00954 655 Pfam CYTH domain 272 404 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00954 Arst-Chr1 9601866 9607770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00954 53 236 PRT Gene Family AT1G55810 30.412 1.54e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00954 K00876 - gmx:100781286 923.694