Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00944 ATGGGAGACAGAGAGAATTTCGAGGTAGATAGAGACCGGGATCGCGTGAATTATTCGACTAGTATGGCTTCGGATTGGAGGTTTGGTGTTGGGAACTTTGCAAATTCAATGGTGGATTCGTATGTTACAAACTTTTGGGACCACCCCAATTCCCAGAACCTGGGATTTTGTGACATTAATGGGGGCTCTTCGAACATGAACGTGATTGGAAAAGATGGATTCGGCTACGGTAGAGGCAGTCATGATCATAGGACACTAGAAATGGGTTGGAACCATGCTAGTTCTGTGTTGAAGGGTGATAACAATGCTTTCTTGCCTAATGGACCAGCAATGCTTCCTCAGAGTTTATCTCAGTTTCCGAGTGATTCCGGATTCATCGAGAGGGCTGCGAGACTCTCGTGCTTTGGCGCTGGGAATTCCGTGGACATGGTGAACTCATTTGGGATTCCTCAATCCATGAACCTTTATGCTAGGATTGGGGGAACAATGCAGGGAACAGGGGATGCTCTTTTAGGACATGGATTAAGATCAGCAGCACTCGGAGGACAATCTCATAAAAGTGATCCGAATGTAGTTGAAGATGCGAAAGATGATAAAGAAATGACTCTCCAGGATGATAAAAGAAGTGAAAATCTTGCAGTGTCTCATGATGAAGGGAAACAAGCTCTTGGTGGTTCTGCTAATGAATCAGATAGAGCCGAATCGAGTGGCCGAGATGATTCCCCAATGTTGGAGTGTACAAGTGGGGAGCCTTCGAATAAGGGACTAAGCTCAAAGAAAAGGAAAAGAATTGGACTAGATGCCGATAAAGATAAAGTCGATGGAAGTCCTGAACAACCTGGTGCAGCCGTGAAGGAGAATTCCGGGAGTCGACAGCAAAAGGGGGAGCAACAACCAACTCCATCAACCAAGGGGTCCGGGAAGAATGCCAAGCAGGGTTCTCAAGCATCTGATTCACCTAAGGAGGAGTACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCACAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAGCGTATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACGGGAAAGGCGGTGATGCTAGACGAAATTATAAACTATGTACAGTCTCTTCAAAGACAGGTTGAGTTTTTGTCAATGAAACTTGCCACGGTAAATCCGCGGATGGATTTTAATATTGAGGGATTGCTTGCTAAAGAAATTCTTCAGCAACGGGCCGGTACTTCTTCCGCGCATGGGTTTCCTCCAGAATTGTCCATGGCTTTTCCGCCATTACATCCATCTCGACCAGGACTTATTCATTCGACTCTTCCTAGCATGGCAAATTCATCGGATATACTTCGGCGGACGCTTCAACCAAATTTGGCGCACTTGAGCGGAGGATTCAAGGACCCAAATCAGCTTCCTGAAGTCTGGGATGACGAGCTTCACAACGTTGTACAGATGACATTTCCGACATCTGCCCCTCCGAGTTGCCAAGACCTGGATGGTTCTGCGCCTTCGGGTCAAACAAAAACTGAACCTTGA 1563 0.4683 MGDRENFEVDRDRDRVNYSTSMASDWRFGVGNFANSMVDSYVTNFWDHPNSQNLGFCDINGGSSNMNVIGKDGFGYGRGSHDHRTLEMGWNHASSVLKGDNNAFLPNGPAMLPQSLSQFPSDSGFIERAARLSCFGAGNSVDMVNSFGIPQSMNLYARIGGTMQGTGDALLGHGLRSAALGGQSHKSDPNVVEDAKDDKEMTLQDDKRSENLAVSHDEGKQALGGSANESDRAESSGRDDSPMLECTSGEPSNKGLSSKKRKRIGLDADKDKVDGSPEQPGAAVKENSGSRQQKGEQQPTPSTKGSGKNAKQGSQASDSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIEGLLAKEILQQRAGTSSAHGFPPELSMAFPPLHPSRPGLIHSTLPSMANSSDILRRTLQPNLAHLSGGFKDPNQLPEVWDDELHNVVQMTFPTSAPPSCQDLDGSAPSGQTKTEP 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00944 520 CDD bHLH_AtBPE_like 323 408 - -
Arst1g00944 520 Gene3D - 330 403 IPR036638 GO:0046983
Arst1g00944 520 Pfam Helix-loop-helix DNA-binding domain 336 384 IPR011598 GO:0046983
Arst1g00944 520 FunFam Basic helix-loop-helix transcription factor 330 402 - -
Arst1g00944 520 MobiDBLite consensus disorder prediction 189 215 - -
Arst1g00944 520 MobiDBLite consensus disorder prediction 496 520 - -
Arst1g00944 520 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 226 429 IPR024097 GO:0006355
Arst1g00944 520 SMART finulus 339 389 IPR011598 GO:0046983
Arst1g00944 520 MobiDBLite consensus disorder prediction 180 322 - -
Arst1g00944 520 MobiDBLite consensus disorder prediction 255 276 - -
Arst1g00944 520 MobiDBLite consensus disorder prediction 283 319 - -
Arst1g00944 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
Arst1g00944 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 402 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00944 Arst-Chr1 9486893 9491005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00944 37 496 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.681 5.25e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g00944 HLH 6.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00944 - - gmx:100783810 661.759