Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00896 ATGAGTTGCTTTGCATGGTGTAATACATCAGACCCAAGGATTAAGAGGTCATTGAGGAGGAGCATTGGGGATTACCATGGAGGAAAAACTCTTGCAGCATTTGCCAACATGTCTTTTAAAACTGATAGTGGCAAGAGAAAATTTATAGAGGAGATAGCAAGACTTGGAAAAGGGAATATTACCTCAAAAGCTTTTTCATTTAGAGAACTATGTGCTGCAACTCAAAACTTTCACCCTTCCAATGTGATTGGTGAAGGAGGCTTTGGTAGGGTTTACAAAGGATACCTTAAAAGCACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGGGAATTTTTTGTTGAGGTTTTGGTTTTGAGTCTTTTGAAACACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGTGAACAAAGGATTTTGGTGTATGAATACATGGTTAATGGTTCTTTAGAGGATCATTTACTTGACATCGATCCAGATAGAACACCATTAGATTGGCAAACTAGAATAAAAATTGCAGAAGGTGCAGCGAAAGGACTCGAATACTTGCACGAAATAGCAAATCCTCCGGTAATATACCGTGATTTTAAAGCATCAAATATTCTTTTAGACGAAAATTTCAATCCAAAGCTATCTGATTTTGGACTCGCAAAAGTTGGTATACTTGGTGATGAAATGGCACAAGTATCCACAAGGGTCATGGGAACCTATGGCTATTGCGCACCCGAATATGCATCCACAGGACAATTGACTATAAAATCAGATGTTTATAGTTTTGGAGTTGTGTTCTTGGAAATGATCACAGGAAGAAGAGTGATTGATAATTCGCGAAAAACAGAGGAAGCAAACTTAGTCCTTTGGGCACAACCACTTCTAAGAGACAGAAGAAAATTTGTACAAATAGCAGATCCATTGCTAGAAAATAAATACCCCATAAAGGGTTTGTACCAAGCTCTAGCAATAGCAGCAATGTGTCTTCAAGAGGAAGCTGAAACAAGGCCATGGATCAGTGATGTGGTTACTGCTCTTTCCTTTTTAGCAACCAAGAAGGTGGACGGAGATGCTTCCTTAAACGACAATTGTACTCAAGGTGGCGATTTTAATGGAGACAACAATTCGAATGACGACGAAAATAGCGACGATGGCAATAATAATAAGAATAAAATTTATGACGGATACGGAGACAACGATAAAGATAAAGATATTAATAATAATATTGACAATGACAACAACGATGATAATGATGATGTTAAGGAAAATAAAGGATAG 1296 0.3796 MSCFAWCNTSDPRIKRSLRRSIGDYHGGKTLAAFANMSFKTDSGKRKFIEEIARLGKGNITSKAFSFRELCAATQNFHPSNVIGEGGFGRVYKGYLKSTDQVVAVKQLDRNGFQGNREFFVEVLVLSLLKHPNLVNLVGYCAEGEQRILVYEYMVNGSLEDHLLDIDPDRTPLDWQTRIKIAEGAAKGLEYLHEIANPPVIYRDFKASNILLDENFNPKLSDFGLAKVGILGDEMAQVSTRVMGTYGYCAPEYASTGQLTIKSDVYSFGVVFLEMITGRRVIDNSRKTEEANLVLWAQPLLRDRRKFVQIADPLLENKYPIKGLYQALAIAAMCLQEEAETRPWISDVVTALSFLATKKVDGDASLNDNCTQGGDFNGDNNSNDDENSDDGNNNKNKIYDGYGDNDKDKDINNNIDNDNNDDNDDVKENKG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00896 431 FunFam probable serine/threonine-protein kinase RLCKVII 40 153 - -
Arst1g00896 431 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Arst1g00896 431 ProSiteProfiles Protein kinase domain profile. 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00896 431 PANTHER OS07G0668900 PROTEIN 49 362 - -
Arst1g00896 431 MobiDBLite consensus disorder prediction 400 416 - -
Arst1g00896 431 Gene3D Transferase(Phosphotransferase) domain 1 154 373 - -
Arst1g00896 431 CDD STKc_IRAK 83 352 - -
Arst1g00896 431 MobiDBLite consensus disorder prediction 371 431 - -
Arst1g00896 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Arst1g00896 431 SUPERFAMILY Protein kinase-like (PK-like) 63 357 IPR011009 -
Arst1g00896 431 Gene3D Phosphorylase Kinase; domain 1 33 153 - -
Arst1g00896 431 Pfam Protein kinase domain 78 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00896 431 FunFam Serine/threonine-protein kinase PBS1 154 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00896 Arst-Chr1 9062974 9065191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00896 59 366 Glycoside Hydrolase AT3G07070 68.506 6.58e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst1g00896 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00896 - - gmx:100790474 575.859