Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00829 ATGATGCTGCAACTCAAGATAGTGACCATAACCGCGATCTGCTTGTGGTGGACATGGCATGATGATCTTCACGGTGCAGTTGTTGTTGTTGCAGATCCACAAACAAATCTAATAAACAAAGGGTGCAGTTCATACTCGCTAAACGGAACAGAGTTGAAGAATTTACATGCCAATGTGAACGGAACTGTTTCAACGATGAGGGGAGAGATAACGGGAAGTGGAAAGTATTTTGGAACATCACAACAAACAAGGGGAGAGGTAGCAACTTATGCTCTCTTTCAGTGCAGAGATTACCTCTCTCAGAGCGACTGCCTCGCTTGCTTCGACGCCGCTGCCGCGCAGAACCGCAACTGTTCCGATGGTAGTAATGGTGCCAGAGTCACCTTTGACGGCTGTTTTCTAAGATATGACAGTGATATGTTCTACGACAAGACCACAGAACCTGGGAACGATGGTGTATTATGTGGGAGCATGCCTACATCAGACACAGCTACTACTTTTGGTGCAACTGTAACTCAGGCTCTGAAGAATCTCCAATTAGCAACACCAAGAATCAAAGGCTTCTTTGCTGCCACTAAAACACTAGTAGCTAGTGGTGGCGGTTTCGTGTATGCTGTCGCGCAATGTGTTGAAACCGCCACTGAAAGCTCTTGCTTGGATTGCTTGACTTTTGGATTTGTTAACTTAAAGAGTAATTGCATTCCCAACATAGATGGTAGGGCTTATAATGCAGGGTGCTTTATGAGATACTCAAATTTACCCTTCTTTTCTGATAACCAAACCATTGACATCACTCCCTATTTAAACCAAGGAGGTTCAAGCAATAAATGGGGCATTATTGGTGGTGTTGTTGGAGGCATTGCTCTTTTTGTGATCTTCTTTGCATTATTTTTCTGGTATAAACGATCCAACAAGAAAAAGGAAGAGCTTCATAGAGGTGATATATTGGGGGCAACTGAATTGAAAGGTCCAATTAATTACAGCTATAATGATTTGAAAGCTGCAACAGAAAATTTCAGTGAAAATAATAAACTTGGAGAAGGAGGCTTTGGCGACGTATACAAGGGAATTCTGGAAAATGGAAAAGTTGTGGCAGTCAAGAAATTGATTCTAAGCCAATCCAAGAAGATGAAGGATGATTTTGAAACTGAAGTAAAACTTATAAGTAATGTGCATCATCGTAACCTTCTTAGACTTCTTGGATGTTGCAATAAAGGCCAAGAGAGAATCCTTGTTTATGAGTATATGGCAAATAAGAGCCTTGACAAATTCTTATTTGGTGACAAAAAAGGTTCCCTTAATTGGAAGCAACGTTACGATATAATTATAGGCACAGCTAGAGGCTTGACATACTTACACGAGGAATTTCATATTTCTATTATACATCGAGATATAAAAACTAGTAATATTCTTTTGGACGATGAATTTCAACCCAAAATTGCCGATTTCGGATTAGCTAGGCTTTTACCCAGAGATCAATCCCATCTTAGCACAAGATTTGCTGGAACAATGGGATATACTGCACCAGAATATGCTATTCATGGCCAATTATCGGAAAAAACCGATGTTTATGGCTATGGAATTGTGGTTCTAGAAATTATAAGTGGTAAAAAATGTACAGAAGTGAACATTGATATTGACGATGGCCAAGAATACCTTCTTCAACAAGCATGGAAACTATATGAACAAGGCATGCACATTGAGTTAGTGGATGAAAGCATAAACCCTAATGAATATGATAAAGAAGAAGTGAAGAAAATAATAGAAATTGCTTTGTTGTGCACTCAAGCATCAGCCACAATGAGACCAGCAATGTCTAAAGTAGTAATCTTACTTAGTAGCAATAATAAGGGCTTATTTGAGAATATTCAACCTTCAATGCCTACTTTTATTGAGTCAAATTTAAAGGCCAGGGAAGATATCTTTGCCACAAATAATAATTCCTCTACACCAATTAATTCTAGGGTCAATGTATCCAATGCAACTGTCTCTACTAATTCTATAGTATCAGGTAGATGA 2019 0.3903 MMLQLKIVTITAICLWWTWHDDLHGAVVVVADPQTNLINKGCSSYSLNGTELKNLHANVNGTVSTMRGEITGSGKYFGTSQQTRGEVATYALFQCRDYLSQSDCLACFDAAAAQNRNCSDGSNGARVTFDGCFLRYDSDMFYDKTTEPGNDGVLCGSMPTSDTATTFGATVTQALKNLQLATPRIKGFFAATKTLVASGGGFVYAVAQCVETATESSCLDCLTFGFVNLKSNCIPNIDGRAYNAGCFMRYSNLPFFSDNQTIDITPYLNQGGSSNKWGIIGGVVGGIALFVIFFALFFWYKRSNKKKEELHRGDILGATELKGPINYSYNDLKAATENFSENNKLGEGGFGDVYKGILENGKVVAVKKLILSQSKKMKDDFETEVKLISNVHHRNLLRLLGCCNKGQERILVYEYMANKSLDKFLFGDKKGSLNWKQRYDIIIGTARGLTYLHEEFHISIIHRDIKTSNILLDDEFQPKIADFGLARLLPRDQSHLSTRFAGTMGYTAPEYAIHGQLSEKTDVYGYGIVVLEIISGKKCTEVNIDIDDGQEYLLQQAWKLYEQGMHIELVDESINPNEYDKEEVKKIIEIALLCTQASATMRPAMSKVVILLSSNNKGLFENIQPSMPTFIESNLKAREDIFATNNNSSTPINSRVNVSNATVSTNSIVSGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00829 672 FunFam Cysteine-rich receptor-like protein kinase 2 150 255 - -
Arst1g00829 672 Pfam Protein kinase domain 340 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00829 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Arst1g00829 672 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Arst1g00829 672 Gene3D - 153 255 IPR038408 -
Arst1g00829 672 Gene3D - 34 141 IPR038408 -
Arst1g00829 672 ProSiteProfiles Protein kinase domain profile. 339 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00829 672 Gene3D Phosphorylase Kinase; domain 1 315 415 - -
Arst1g00829 672 ProSiteProfiles Gnk2-homologous domain profile. 148 255 IPR002902 -
Arst1g00829 672 Pfam Salt stress response/antifungal 52 138 IPR002902 -
Arst1g00829 672 Pfam Salt stress response/antifungal 160 252 IPR002902 -
Arst1g00829 672 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 639 - -
Arst1g00829 672 CDD STKc_IRAK 345 609 - -
Arst1g00829 672 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00829 672 FunFam Cysteine-rich receptor-like protein kinase 2 302 415 - -
Arst1g00829 672 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Arst1g00829 672 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Arst1g00829 672 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
Arst1g00829 672 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00829 Arst-Chr1 8313770 8320289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00829 58 640 Receptor kinase-like Gene Family AT1G70520 37.099 2.68e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst1g00829 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00829 - - gmx:100813585 817.379