Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00828 ATGTTGCAACTTAAGGTAGTGGCCATAACCCTAATATGGTGGTGGTGGACATGGCATCTTCACGGTGCAGTTGTTGTTGCAGATCCTCAAGTGAATCTAATAAACCAAGGGTGCAGTTCATACAACGAAACCAACTTGAGAAGCTTCTTTGCCAACATCAATGGAACGTTTTCGGAGCTAAGAAGTGATATAGTGAATCAAAGCAAGCACTTTGGAACTGCACAAGAAGCGAGGGGAGAGGTTATCACATACACAATGTTTCAGTGCAGAAACTATCTTTCTCAAAGGGATTGTCTTAGTTGCTTCAACAACGCTACCATTCAAATTCGGAATTGTTCAAATGGGAATGGTGCCAGAGTCATCTATGATGGTTGCTTCCTCAGGTATGAGAGCAATATCTTCTTCAGCCAAACAACTGAACCTGGGAATGGTGTAAAATGTGGGAACAAAACAGGAAAAGGAGGCAATGATTTTGTTTCAGCTGGAAAACAAGCTCTAATGAATCTCCAAACAGCAACACCAAAAATCAAAGGATTCTATGCTGCCACAAAGACACAATTGGCTAATAATAATGGTGGTGCAATCTATGCTGTTGCACAGTGTGTTGAAACTGCCACTCAAAGTGATTGTTTGGCATGCATGAATGTTGGATACAACAATTTGCAAACATGTCTTCCTAATTCTGATGGTAGGGCTTATGATGCTGGTTGTTTTATGAGATATTCACAGACTCCCTTTTTTGCTGATAATCAAACCATTGATATCACTCCATACTTGGCACAAGGAGGTTCAAGCAAGAAGTGGGCCATTATAGGTGGTGTTGGTGGAGGTGTAGTTCTTGTTGTGATCCTTCTTGCATTATTTGCATGGTATAGACATTCAAAAAAACCCAAAAGGGTTCCTAGAGGGGATATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAATTACAAGTATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGAAGAAAATAAATTAGGAGAAGGGGGTTTTGGTAATGTGTACAAGGGTACTCTTAAAAATGGGAAAGTTGTGGCAGTGAAGAAATTGATTTTGGGGCAAACTGACAAAATGGAAGATCATTTTGAGAGTGAAGTAAAGCTGATTAGTAATGTGCACCATAGGAATCTGGTGAGGCTTCTTGGTTGTTGTAGCAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAATAGTAGCCTTGATAGATTCTTATTTGGTAACAAGAAAGGCTCCCTGAATTGGAGACAACGTTGTGACATAATTTTAGGGACAGCAAGGGGATTGGCCTATCTTCATGAGGAATTCCATGTTTCTATTATTCACAGAGATATAAAGAGTGGAAATATTCTATTGGATGATGATCTTCAACCTAAAATTGCTGATTTTGGTTTGGCTAGACTTCTTCCTGGGGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATACAGCACCTGAATATGCAATTCATGGCCAATTATCAGAAAAAGCAGACACTTATAGTTATGGCATTGTAGTTCTAGAAATTATAAGTGGTCAAAAGAGTACCGAAATGAAGGTTGACGATAATGGACATGAATATCTTCTTCAACGAGCATGGAAACTGCACGAGGAAGGAATGCACGTAGAGTTAGTGGACAAAAGCATAGAAGCTAATGAATATGAAACAGGCGAAGTGAAGAAAATAATGGAAATTGCATTGATGTGCACTCAAGCATCAGCATCAATGAGGCCAACAATGTCTGAAGTAGTTGTGTTACTAAAAAGCAAAGGCTTATTTGAGAATATGCAACCTTCAATGCCTGTGTTTGTTGAGTCAAATATGAAAGCCAGAGGAGATATTTCTGCTTCAACCGCTGGTTCCTCTACAACTACTTCCAATGCTACTGTCTCCACTTCTATAGTATCAGCAAGATGA 1959 0.3931 MLQLKVVAITLIWWWWTWHLHGAVVVADPQVNLINQGCSSYNETNLRSFFANINGTFSELRSDIVNQSKHFGTAQEARGEVITYTMFQCRNYLSQRDCLSCFNNATIQIRNCSNGNGARVIYDGCFLRYESNIFFSQTTEPGNGVKCGNKTGKGGNDFVSAGKQALMNLQTATPKIKGFYAATKTQLANNNGGAIYAVAQCVETATQSDCLACMNVGYNNLQTCLPNSDGRAYDAGCFMRYSQTPFFADNQTIDITPYLAQGGSSKKWAIIGGVGGGVVLVVILLALFAWYRHSKKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSEENKLGEGGFGNVYKGTLKNGKVVAVKKLILGQTDKMEDHFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGNKKGSLNWRQRCDIILGTARGLAYLHEEFHVSIIHRDIKSGNILLDDDLQPKIADFGLARLLPGDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEMKVDDNGHEYLLQRAWKLHEEGMHVELVDKSIEANEYETGEVKKIMEIALMCTQASASMRPTMSEVVVLLKSKGLFENMQPSMPVFVESNMKARGDISASTAGSSTTTSNATVSTSIVSAR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00828 652 FunFam Cysteine-rich receptor-like protein kinase 2 30 134 - -
Arst1g00828 652 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00828 652 ProSiteProfiles Protein kinase domain profile. 329 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00828 652 FunFam Cysteine-rich receptor-like protein kinase 2 142 246 - -
Arst1g00828 652 Gene3D - 30 134 IPR038408 -
Arst1g00828 652 Gene3D - 144 246 IPR038408 -
Arst1g00828 652 FunFam Cysteine-rich receptor-like protein kinase 2 294 405 - -
Arst1g00828 652 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Arst1g00828 652 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Arst1g00828 652 SUPERFAMILY Protein kinase-like (PK-like) 317 627 IPR011009 -
Arst1g00828 652 CDD STKc_IRAK 335 602 - -
Arst1g00828 652 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Arst1g00828 652 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Arst1g00828 652 SMART serkin_6 329 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00828 652 FunFam Cysteine-rich receptor-like protein kinase 2 406 609 - -
Arst1g00828 652 Pfam Salt stress response/antifungal 153 243 IPR002902 -
Arst1g00828 652 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Arst1g00828 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 634 - -
Arst1g00828 652 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Arst1g00828 652 MobiDBLite consensus disorder prediction 628 652 - -
Arst1g00828 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00828 Arst-Chr1 8304382 8310810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00828 25 652 Receptor kinase-like Gene Family AT1G70520 36.646 4.41e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst1g00828 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00828 - - gmx:100801131 915.22