Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00769 ATGGGGAGAAGACCAGCGAGGTGTTACAGGCAAATCAAGAACAAGCCATATCCAAAATCGCGATTCTGCAGGGGTGTGCCTGACCCTAAGATCCGAATCTATGACGTCGGAATGAAGAAGAAGGGTGCGGATGAGTTTCCGTTCTGCGTGCACCTTGTTTCATGGGAGAAGGAGAATGTTTCCAGTGAGGCACTTGAGGCTGCTCGCATTGCTTGCAACAAGTACATGTCCAAATTCGCAGGCAAAGACGCTTTCCATTTGCGTGTTAGGGTTCATCCTTTCCATGTTCTCCGTATCAACAAGATGCTCTCCTGCGCCGGCGCCGACAGGCTCCAGACTGGCATGAGGGGCGCCTTTGGCAAGCCGCAGGGCACTTGCGCTAGGGTCAACATTGGCCAGGTGCTTCTCTCGGTTCGCACCAAGGATAACCATGGTCATCATGCTCAGGAGGCTCTGCGACGCGCCAAGTTCAAGTTCCCCGGCCGCCAGTCCAACTGGAAGAACATGGGGTTTCTATTTTTCAGTGTGTATGCTCATTTTTTACCCTTTGTATTTATTGGAAATGCTTGCTTGCTTAGTAATTCTTTTCCAATTTTCAGGGGATTTACAAAGTTCAACCGAACAGAGTATTTGAAGTTAAAGTCTGAGAACAGAATTGTGCCTGATGGTGTCAATGCCAAGGTTCGTTTCCACCCTGATAAATTATAA 708 0.4873 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGADEFPFCVHLVSWEKENVSSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRTKDNHGHHAQEALRRAKFKFPGRQSNWKNMGFLFFSVYAHFLPFVFIGNACLLSNSFPIFRGFTKFNRTEYLKLKSENRIVPDGVNAKVRFHPDKL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00769 235 PANTHER 60S RIBOSOMAL PROTEIN L10 1 228 IPR001197 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 SUPERFAMILY Ribosomal protein L16p/L10e 4 164 IPR036920 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 FunFam 60S ribosomal protein L10 1 180 - -
Arst1g00769 235 ProSitePatterns Ribosomal protein L10e signature. 108 129 IPR018255 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 Pfam Ribosomal protein L16p/L10e 12 163 IPR016180 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 Gene3D - 204 231 - -
Arst1g00769 235 CDD Ribosomal_L16_L10e 41 163 IPR016180 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 NCBIfam 50S ribosomal protein L16 1 163 IPR001197 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 Gene3D Ribosomal protein L10e/L16 1 178 IPR036920 GO:0003735|GO:0005840|GO:0006412
Arst1g00769 235 FunFam 60S ribosomal protein L10, putative 204 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00769 Arst-Chr1 7833273 7835015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00769 1 227 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 76.211 4.58e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00769 K02866 - gmx:100779884 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00769 1 7833273 7835015 Arst1g00769 1 7833273 7835015 ECH