Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00743 ATGGGTTCCGACATTTGCGTCAATGGTTCTTGCTGCGTGCACGAATGGAAGAAGGGATGGCCTCTACGATCTGGTGGATTCGCCCAACTATGCATCAAGTGCGGATTTATGGAGGAATGGAAGCGTGAGATAATTGATACATTATCTGCAAATGAGTATTCACTATTCTGTAATAACTTCCACCGTCGCGAAACTGGATGGAAGGAGTGTAACTTTTGCAACAAGCCTATCCATTGTGGATGCATAGCATCTAAATCTTTGTTCGAGTACCTTGACTTTGGCGGTGTAGGATGTGTTAGCTGTGTAAATGCTTCCCAACTACGTTTGACGAGGAATACTGAAAATGGGTCTGTTTCGACTACCAAAAATAATGCAAGTGATCGGCATTCTGCGCATATTGACAACAGACAGTTTGTCAGTAGCGTGGATGAAGGAAAACTTATGGAGTTCTGCAGAATTGTTGAAGCTAGCGAATCAAGCCGTTGGAATCATGCTCAGAGAGACAACATAATCTCATGTAATGGGCAAAATGGCAAAGAAGTGACATTCAGGGAAGTGGAAAGTGGATTTTCAAATGTGATAAAGCCATCGGTTCAGTCATTAACGTTTTCTGCTTTAGAAAATAGTAGACCGACATGGGAAATTAAAAGTAGACATGAACCAATGACTCAACCATCTTTAAACATGTGTCTGGGAAATCCGTCTGGGAGCAACTTGGTACTGCCTTCAGCAACTGAGATTGCAGAAGGAAGACTTGAGAGCAAAGCCTCCAACTTTCAACAAAGATCTCGGCCCATATTGCCCAAACCATCAAAGACTGGACTTACAATGAATGTGGAAACAGACAAAGGCTCAACTTCTCAGGCACGCATTGCTCGACCACCTGCCGAGGGGAGGGGCAAAAACCAGTTGCTTCCTCGATACTGGCCCAGGATTACTGATCAAGAACTGGAGCGGTTGTCTGGAGATTTGAAGTCCACTGTAGTGCCGTTGTTTGAGAAGGTGTTGAGTGCTAGTGATGCTGGCCGAATTGGTCGACTTGTTCTCCCAAAAGCATGTGCCGAGGCTTATTTTCCTCATATTTCACAATCAGAAGGTCTTCCTTTACGGGTCCAAGACGTGAAGGGGAATGAATGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGTCGGATGTATGTATTGGAGGGTGTGACACCTTGCATACAGTCCATGCAATTACGTGCTGGTGATACGGTTACATTTAGTCGGATAGACCCTGGGGGTAAACTTGTTATGGGTTTCAGGAGGGCGACAAATTCTTCAGACACCCAGGATGCCTCTACATCTGCACAATCGAATGGCATTTCAACTACAGGAACCATCTCTGGTGGAACTGAGAATCTGCTATCAGGAAGTAATTATGCTGATCTTCTCCAGTCGGCGAAAGGGAATGGGGAACCTAATTCTAGTGGACATCCAGAACATCCACGTTCAGTTTCAGAGAAGAAGAGGACTCGCAATATTGGGCCTAAAAGTAAGAGGTTGCTCATTGATAATGAAGATTCTATGGAGTTGAGACTTACCTGGGAAGAAGCACAGGACTTGCTTCGTCCGCCACCTAGTGTTAAGCCAAGTATTGTCACCATTGAGGACCAAATATTTGAAGAATATGATGAGCCCCCGGTTTTCGGAAAGAGGACTATTTTCAGTGCCTGTTCATCTGGGGGGAAGGAGCAGTGGGCTCAATGTGATGATTGCTCTAAATGGCGAAAGCTTCCCGTCGATGCTCTTCTTCCTCCCAAGTGGAATTGCTCTGAGAATGTTTGGGATGCAAGCAGGGCTTCATGTTCTGCTCCAGAGGAGATGAGTTCAAGGGAATTAGAAAATCTTCTGAGAACCAACAAAGATCTTAAGAAGCGGAGAATTGCTGAGAATAATAAACCAATCCAAGAGCATGAGCCTTCTGGGTTGGATGCTCTTGCCAGTGCTGCGGTTTTAGGAGACAATCTTGTTGATCCTGTGGAGTCATCAGCTGGAGCCACCACCAGACACCCTAGACACCGTCCCGGCTGCTCCTGTATTGTGTGCATTCAACCACCAAGTGGAAAGGGGAGACACAAGCCAACATGTACTTGCAATGTGTGCATGACTGTGAAGCGCCGGTTCAAAACCCTGATGCTTAGAAAGAAGAAGCGCCAATCGGAGCGCGAAGCAGATGCTGCTCAAAAAGGTCATATTCCCCGAAAAGATGAGTCAGATACCAATGGAAGAGCTTCAAGAGATTATCCTAAACCGAGTCACTTGGACAAAGAGGGAGGACTAAACAAAGATCAACAACCAGCCCATGTGGGAGAGTCGAATGCCGGACAAATAGACCTGAACTCGCATCCGAATCGCGACGACATGGCAGCCGATACATCGGCGCCTTGCACCTCGAATCATCTTGAAACAACAAACCGAGAGGTAAGGAACTATATGAATCAAAATGGTGTTAGAAGCTACAATAATGGTGAAATGCAGGATAATCAGCATCCTTCTTTACTCAATCAATCTAATGGAGGGTGCTTTGGATCATCCATTGTGTGGAAAATGGAAAGAAAAGATGAGGTTTACAATCATGCCAATCAAAGTCAAAGCCATAGTCAAAACAACAATCTTTCTTGA 2649 0.4511 MGSDICVNGSCCVHEWKKGWPLRSGGFAQLCIKCGFMEEWKREIIDTLSANEYSLFCNNFHRRETGWKECNFCNKPIHCGCIASKSLFEYLDFGGVGCVSCVNASQLRLTRNTENGSVSTTKNNASDRHSAHIDNRQFVSSVDEGKLMEFCRIVEASESSRWNHAQRDNIISCNGQNGKEVTFREVESGFSNVIKPSVQSLTFSALENSRPTWEIKSRHEPMTQPSLNMCLGNPSGSNLVLPSATEIAEGRLESKASNFQQRSRPILPKPSKTGLTMNVETDKGSTSQARIARPPAEGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHISQSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVTFSRIDPGGKLVMGFRRATNSSDTQDASTSAQSNGISTTGTISGGTENLLSGSNYADLLQSAKGNGEPNSSGHPEHPRSVSEKKRTRNIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQIFEEYDEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWNCSENVWDASRASCSAPEEMSSRELENLLRTNKDLKKRRIAENNKPIQEHEPSGLDALASAAVLGDNLVDPVESSAGATTRHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADAAQKGHIPRKDESDTNGRASRDYPKPSHLDKEGGLNKDQQPAHVGESNAGQIDLNSHPNRDDMAADTSAPCTSNHLETTNREVRNYMNQNGVRSYNNGEMQDNQHPSLLNQSNGGCFGSSIVWKMERKDEVYNHANQSQSHSQNNNLS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00743 882 ProSiteProfiles Zinc finger CW-type profile. 569 619 IPR011124 GO:0008270
Arst1g00743 882 SMART B3_2 332 433 IPR003340 GO:0003677
Arst1g00743 882 Coils Coil 615 642 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 725 771 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 260 302 - -
Arst1g00743 882 CDD B3_DNA 330 431 IPR003340 GO:0003677
Arst1g00743 882 SUPERFAMILY DNA-binding pseudobarrel domain 330 432 IPR015300 -
Arst1g00743 882 MobiDBLite consensus disorder prediction 274 288 - -
Arst1g00743 882 Gene3D - 572 627 - -
Arst1g00743 882 Pfam B3 DNA binding domain 332 432 IPR003340 GO:0003677
Arst1g00743 882 ProSiteProfiles B3 DNA-binding domain profile. 332 433 IPR003340 GO:0003677
Arst1g00743 882 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 834 - -
Arst1g00743 882 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 834 - -
Arst1g00743 882 Gene3D - 310 437 IPR015300 -
Arst1g00743 882 MobiDBLite consensus disorder prediction 473 489 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 490 509 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 473 509 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 775 789 - -
Arst1g00743 882 Pfam CW-type Zinc Finger 574 616 IPR011124 GO:0008270
Arst1g00743 882 MobiDBLite consensus disorder prediction 721 814 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 800 814 - -
Arst1g00743 882 FunFam B3 domain-containing transcription repressor VAL1 310 437 - -
Arst1g00743 882 MobiDBLite consensus disorder prediction 433 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00743 Arst-Chr1 7577189 7584341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00743 1 799 B3 DNA Binding Superfamily AT2G30470 50.858 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst1g00743 B3 1.4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00743 K09287 - gmx:100789848 1310.82