Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00728 ATGCGCAGGGCCTACTGCGCCGTCGCCGTCGAGTGCACCGTCAAGTACCTCGCCGCCTCCTACGACGGCACCACCAGCGGTAAGTACTTATCCGCGGTGACGCGTATCTGGCGCGGCCGCGTGGAGGAGTTGGAGCAGGGCCAGAGCGAGCTGTTCTTCGACGAGACTGCGCGATGGAGGGACGACATTGAGGCCGCACTTTTTGACACTAGGGTTTCTGATAGGTTGAAGGAGTTGAATACCCGAAACGACGCGTTTACTGAAGTTAGGTTTTATCTGCAGGAAGTGTGGGAAACAATGGGTCCTTCTTTTCTTGAATCGGTAGCAGAAATGACAAAGAACAAGGGAAAGACGAAGGGTAAGGGGAAAGGATTGCCGAATGTGATTTTGAATCCGGCGCCGGTGACTATAGTGCCAGGGTATACTACAGGTGTTTGCAGAAATGCCTCTGGTGCTGAACAGGCAAGGGATCATGGTGTTGATGACAATGGTGACGGAGGCAATGATGGTTCACGTTGCATGGACGGTGTGGAGGTGAAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCATGCAAAGAAGAAGAAAGCAAGAGGCAATCCTCAACTTAAACGCAAGCCGCCTGCATTTCGTAGATGCAGTAGAGGAGTTAAAATGTCTAGTGCTGAGGAATTGGGGACAGAAAGGTCATGGAGAAAAAATGATACTGTGCTAAGTGGAGAAGTTAAAACGGCCCGAGAATCTCTTAAATCAAGTTCTTCGGAGCTACGGGCATTGGTCAATGATCCTCTTCTTGAGGCATTGGATATACCTGACGCTGTTAGATCTAAACTTGCACGGAAAGGTACAAATCATGAACAGCCAATGGAAAACCATAGTGGAGATGTAGATGTACGAAACTCAAATACTTGCAGTACTATTAGTCCTTATCAACCTAATGATGCCGAGCACAAGAAGTCGCCTTCTGTTGAGCCGAACAAAACTGCTCATAAAAGACCCAATTTGATGGAGCCGAGTGGTACTTCTCAAACTTATGAGTGGAATGATTCAATAGAAAACATGCCCAATGGAATGCAGCCAAGAAGGAAGAAAAGGAAGAATAGAAAATGGTCTTCATTAGAAGAGGAGACACTAAGGACTGGTGTACAAATGTTTGGTGCAGGAAATTGGAAAACAATTCGAAGTTTTTACAGTGATGTATTTGAACATAGACTATCAGTTGATTTGAAGGACAAGTGGAGAAACATGATGCGGTAG 1260 0.4683 MRRAYCAVAVECTVKYLAASYDGTTSGKYLSAVTRIWRGRVEELEQGQSELFFDETARWRDDIEAALFDTRVSDRLKELNTRNDAFTEVRFYLQEVWETMGPSFLESVAEMTKNKGKTKGKGKGLPNVILNPAPVTIVPGYTTGVCRNASGAEQARDHGVDDNGDGGNDGSRCMDGVEVKRAEGSVDGTQEHAKKKKARGNPQLKRKPPAFRRCSRGVKMSSAEELGTERSWRKNDTVLSGEVKTARESLKSSSSELRALVNDPLLEALDIPDAVRSKLARKGTNHEQPMENHSGDVDVRNSNTCSTISPYQPNDAEHKKSPSVEPNKTAHKRPNLMEPSGTSQTYEWNDSIENMPNGMQPRRKKRKNRKWSSLEEETLRTGVQMFGAGNWKTIRSFYSDVFEHRLSVDLKDKWRNMMR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00728 419 PANTHER MYB TRANSCRIPTION FACTOR 1 419 - -
Arst1g00728 419 ProSiteProfiles Myb-like domain profile. 363 418 IPR001005 -
Arst1g00728 419 MobiDBLite consensus disorder prediction 280 374 - -
Arst1g00728 419 CDD SANT_TRF 371 419 - -
Arst1g00728 419 MobiDBLite consensus disorder prediction 152 230 - -
Arst1g00728 419 Gene3D - 371 419 - -
Arst1g00728 419 MobiDBLite consensus disorder prediction 280 294 - -
Arst1g00728 419 SUPERFAMILY Homeodomain-like 366 418 IPR009057 -
Arst1g00728 419 Pfam Myb-like DNA-binding domain 371 417 - -
Arst1g00728 419 MobiDBLite consensus disorder prediction 295 316 - -
Arst1g00728 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 363 419 IPR017930 -
Arst1g00728 419 MobiDBLite consensus disorder prediction 336 356 - -
Arst1g00728 419 SMART sant 367 419 IPR001005 -
Arst1g00728 419 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00728 Arst-Chr1 7299068 7329933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00728 312 418 Single Myb Histone (SMH) Gene Family AT1G15720 34.188 5.33e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst1g00728 Myb_DNA-bind_6 5.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00728 - K11111 adu:107473962 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00728 1 7299068 7329933 Arst1g00728 1 7299068 7329933 ECH