Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00721 ATGCCACAGCAAGAGTTTTCAATGGCTCTAATGATTCTTCTCATTGTTCTCTCCATTGACATGATTATCATGCAAGGTGCCACAGCTGACTATGGTGGTTGGGAGAGTGCTCATGCCACTTTCTATGGTGGTGGTGATGCCTCTGGCACAATGGGATATGGGAATTTGTATAGCCAAGGTTATGGAACGAACACAGCAGCATTAAGCACTGCTTTGTTCAACAATGGACTAAGCTGTGGATCATGCTATGAGATGAAGTGTAATGATGACCCAAGATGGTGCAAGCCGGGTTCGATCATTGTCACGGCCACCAACTTCTGCCCGCCGAACCCGGCTCTGCCCAACAACAATGGTGGTTGGTGCAACCCTCCTTTGCAGCACTTTGACATGGCTGAGCCAGCATTCTTGCAAATTGCTGAATATAGGGCTGGAATTGTGCCTGTTGCTTTTAGAAGAGTTCCTTGCATGAAGAAGGGAGGAATAAGATTCACCATCAATGGCCACTCTTACTTCAACCTAGTTTTGGTAACAAACGTTGGAGGTGCTGGTGATGTTCATTCAGTTTCCATCAAAGGATCAAGAACTGGGTGGCAATCAATGTCAAGAAACTGGGGGCAAAATTGGCAAAGCAACTCTTACCTCAATGGTCAAACCCTCTCATTCCAAGTCACCGCCAGTGACGGTAGAACTGTCACAAGCTTCAACGTGGCACCATCTAATTGGCAGTTTGGTCAAACCTTCCAAGGAAGCCAATTCTAG 759 0.4664 MPQQEFSMALMILLIVLSIDMIIMQGATADYGGWESAHATFYGGGDASGTMGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCNDDPRWCKPGSIIVTATNFCPPNPALPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCMKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQTLSFQVTASDGRTVTSFNVAPSNWQFGQTFQGSQF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00721 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 160 IPR007112 -
Arst1g00721 252 Gene3D - 21 156 IPR036908 -
Arst1g00721 252 FunFam Expansin 23 156 - -
Arst1g00721 252 SUPERFAMILY PHL pollen allergen 157 249 IPR036749 -
Arst1g00721 252 Pfam Expansin C-terminal domain 161 238 IPR007117 -
Arst1g00721 252 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 159 171 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 99 109 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 135 148 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 171 192 IPR002963 GO:0009664
Arst1g00721 252 PRINTS Expansin signature 235 251 IPR002963 GO:0009664
Arst1g00721 252 Gene3D - 160 252 IPR036749 -
Arst1g00721 252 Pfam Lytic transglycolase 65 149 IPR009009 -
Arst1g00721 252 SMART dpbb_1 65 150 IPR007112 -
Arst1g00721 252 CDD DPBB_EXPA_N 33 155 - -
Arst1g00721 252 FunFam Expansin 160 252 - -
Arst1g00721 252 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Arst1g00721 252 PRINTS Expansin/Lol pI family signature 143 159 IPR007118 GO:0005576
Arst1g00721 252 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Arst1g00721 252 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Arst1g00721 252 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
Arst1g00721 252 SUPERFAMILY Barwin-like endoglucanases 33 178 IPR036908 -
Arst1g00721 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 170 249 IPR007117 -
Arst1g00721 252 PANTHER EXPANSIN-A15 10 252 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00721 Arst-Chr1 7227409 7230831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00721 6 252 Expansin Gene Family AT2G40610 76.190 1.56e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00721 - - gmx:100499976 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00721 1 7227409 7230831 Arst1g00721 1 7227409 7230831 ECH
Arst1g00721 1 7227409 7230831 Arst6g01867 6 22547175 22551287 ECH
Arst1g00721 1 7227409 7230831 Arst7g01563 7 17637040 17639181 ECH
Arst1g00721 1 7227409 7230831 Arst7g01563 7 17637040 17639181 PCT