Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00708 ATGAGTAATTCTCAAATAATCCAGTATTATTTTTTGGTTATTGTTGTTATGGTCACTACTAATTTGGGCACATGGGTAATCCCTACCAATGGCATGAACAATGATGATAATGGAAGGCTCACTCACCATTTCTATAAGAAAACATGCCCTAAGGTGTTGCCAGTGATAAGGTCTGTGGTTGAAAAGGCAATAAAGAAAGAACCGCGCATTGGAGCTTCATTGCTACGTTTGCATTTTCATGACTGCTTTGTTAATGGTTGCGATGCATCAGTTCTGCTAGATGATTCTAATAACATAAATGGTGAGAAGAATTCGCCACCAAATAAGAACTCGCTAAGAGGATTTGAAGTGGTTGATGAGATTAAATCAGAATTAGACAAAGCTTGCAAGGGTCCTATTGTATCATGTTCTGATATCTTAGCTGTGGCGGCTCGTGATTCTGTTGTTATTCTAGGGGGTCCACACTATCGTTACCATGTGCCCTTAGGAAGAAGAGACGCTAGAAGTGCAAGTTATGAAGCTGCAAATACAAGCCTTCCTTCCCCATCTTCAAGCTTCTCAGAGCTTCTCTCTAATTTCAATTCTCATGGGCTGGGCCTTAAAGATCTTGTGGCCCTTTCTGGGGCCCACACTATTGGATTTGCTCAATGTTCCTCCTTTAGGGATAGGATCTACAATGACACCAACATTGACCCAAAACTTGCATCCTACTTGAAATTACAAAAGTGCCCTCAAAGTGGTGGAGATAGTAATTTGGCACCATTTGATTCCACTGATGAAACATTTGACAATGTCTACTACAAGCAATTGTTGGATAACAAGGGGCTTCTTCATTCTGATCAAGAACTCTTCAAGGGAAATAATAGTGAGAGTGATAAGTTGGTGAACCTATTTAGTAGGAATCCAATTGCTTTTGCTAAAAGATTCAAACATTCTATGATCAAGATGGGTAACATGAAGCCTCTTACCGGAAATGAGGGTGAGATTAGACTTAATTGTAGAAAAGTTAATTAA 1014 0.3945 MSNSQIIQYYFLVIVVMVTTNLGTWVIPTNGMNNDDNGRLTHHFYKKTCPKVLPVIRSVVEKAIKKEPRIGASLLRLHFHDCFVNGCDASVLLDDSNNINGEKNSPPNKNSLRGFEVVDEIKSELDKACKGPIVSCSDILAVAARDSVVILGGPHYRYHVPLGRRDARSASYEAANTSLPSPSSSFSELLSNFNSHGLGLKDLVALSGAHTIGFAQCSSFRDRIYNDTNIDPKLASYLKLQKCPQSGGDSNLAPFDSTDETFDNVYYKQLLDNKGLLHSDQELFKGNNSESDKLVNLFSRNPIAFAKRFKHSMIKMGNMKPLTGNEGEIRLNCRKVN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00708 337 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PANTHER PEROXIDASE 72-RELATED 39 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 CDD secretory_peroxidase 40 336 IPR033905 GO:0004601|GO:0042744
Arst1g00708 337 FunFam Peroxidase 43 188 - -
Arst1g00708 337 Gene3D - 43 334 - -
Arst1g00708 337 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 ProSiteProfiles Plant heme peroxidase family profile. 39 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 Gene3D Peroxidase, domain 2 180 316 - -
Arst1g00708 337 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Arst1g00708 337 FunFam Peroxidase 180 316 - -
Arst1g00708 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Arst1g00708 337 SUPERFAMILY Heme-dependent peroxidases 40 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Arst1g00708 337 Pfam Peroxidase 57 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00708 Arst-Chr1 7072944 7078684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00708 38 337 Peroxidase AT5G05340 53.135 9.72e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00708 K00430 - gmx:100816056 431.024