Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00683 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCCGAGCGAAACTCGCAAGAGATGTCAGAACAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTTATCTCTGTACTTAGCAATGTACATTTTCATTACATCATAAGTCCTAGGCAACTGCGAAGATAA 561 0.4242 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVISVLSNVHFHYIISPRQLRR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00683 186 Pfam GINS complex protein 54 162 IPR021151 -
Arst1g00683 186 SUPERFAMILY GINS helical bundle-like 73 173 IPR036224 -
Arst1g00683 186 CDD GINS_B_Psf2 13 74 - -
Arst1g00683 186 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 172 IPR007257 GO:0005634|GO:0006260
Arst1g00683 186 Gene3D - 78 180 - -
Arst1g00683 186 Gene3D - 12 77 - -
Arst1g00683 186 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Arst1g00683 186 PIRSF GINS_PSF2 2 178 IPR007257 GO:0005634|GO:0006260
Arst1g00683 186 CDD GINS_A_psf2 66 166 - -
Arst1g00683 186 FunFam DNA replication complex GINS protein PSF2 78 180 - -
Arst1g00683 186 SUPERFAMILY PriA/YqbF domain 12 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00683 Arst-Chr1 6745698 6753798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00683 1 147 Core DNA Replication Machinery Family AT3G12530 70.748 4.81e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00683 K10733 - gmx:100780528 296.589