Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00657 ATGAATAACAATAATAAAATTGAAGAAGTTGTGTTAGTTGTGGATGATTTGAGATCAATATGTATGAATTATCGGTGTAGAATATGCCATGAAGAAGAATTCGAGAGCTCCAAAAGCTTGGAAGCTCCTTGTGCTTGTTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATTCAGAAATGGTGCAATGAAAAAGGCAATACAACTTGTGAGATTTGTCTCCAGCAATATGAACCTGGATATACAGCACCTCCAAAGAAATCTCAGATAGCTGATGCAGCAATGACCATTAGGGATAGCCTGCAAATAACAAGAAGGGAGGTAGAACCCTTAATAAACGCAACAACAATTGAAAGCGATTACTCTGAATGCACTTCTGCTGCAGATAGAAGCGCTTCGTGCTTTCGATCACTTGCTTTCTCTTTTACACTCATCTTGCTTGTAAGACATCTTTTTGCATTGCTTACAAGTGGCATGGAAGATTATCCATTTACAATTCTTACTGTGTTTATATTAAGGGCAAGTGGAATTATTGTGCCCATGTACATAATAATTAGGACAATTGGAGGCTTACATAGTAGTATTCACCGCCACTATCATCAGGATTCTGACGATGATGACACATCGACAATATCTGATGGAGATGATGAAGAAAACGAGACAAGCCAGGATGAAGATTTAGGATATTCATAG 693 0.381 MNNNNKIEEVVLVVDDLRSICMNYRCRICHEEEFESSKSLEAPCACSGTVKFAHRDCIQKWCNEKGNTTCEICLQQYEPGYTAPPKKSQIADAAMTIRDSLQITRREVEPLINATTIESDYSECTSAADRSASCFRSLAFSFTLILLVRHLFALLTSGMEDYPFTILTVFILRASGIIVPMYIIIRTIGGLHSSIHRHYHQDSDDDDTSTISDGDDEENETSQDEDLGYS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00657 230 Pfam Protein of unknown function (DUF3675) 79 188 IPR022143 -
Arst1g00657 230 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 23 197 IPR033275 -
Arst1g00657 230 CDD RING_CH-C4HC3_MARCH 26 73 - -
Arst1g00657 230 ProSiteProfiles Zinc finger RING-CH-type profile. 18 80 IPR011016 GO:0008270
Arst1g00657 230 ProSiteProfiles Zinc finger RING-type profile. 26 73 IPR001841 -
Arst1g00657 230 Pfam RING-variant domain 26 73 IPR011016 GO:0008270
Arst1g00657 230 SMART ringv_2 25 74 IPR011016 GO:0008270
Arst1g00657 230 FunFam E3 ubiquitin-protein ligase MARCH4 15 83 - -
Arst1g00657 230 MobiDBLite consensus disorder prediction 208 230 - -
Arst1g00657 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 83 IPR013083 -
Arst1g00657 230 MobiDBLite consensus disorder prediction 199 230 - -
Arst1g00657 230 SUPERFAMILY RING/U-box 23 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00657 Arst-Chr1 6585181 6589936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00657 26 73 C3H Transcription Factor Family AT2G37950 42.857 6.72e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00657 - - gmx:100797029 337.421