Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00650 ATGGGGGGTTCCTCACCTTGTGCTTCTTGCAAATTGTTGAGGCGGCGTTGCACCAAAGAATGCATCTTTGCTCCTTATTTTCCTTCTGATGATCCTCGCAAGTTTGCCATTGTGCACAAAGTCTTTGGCGCTAGCAATGTCAGCAAAATGCTTCAGGAACTTCCAATTGATCAAAGAGGAGATGCTGTAAGCAGTTTAGTTTATGAGGCAACTGCAAGAGTGAGAGACCCTGTGTATGGTTGTGTTGGAGCAATATCATACCTTCAAAATCAAGTTACACAATTACAAATGCAACTTGCAGTGGCTCAGGCAGAGATTCTAAGCATCCATCAGATGCAACAAGACCCTTCTAATAACAATACTACCTTATTACCAAGTCAATTATTAGATCAAGATTATAGTGAAAAGTTTCTGCTCCTATCATCAGCTGAAAACAATAACAACTATGACTTTCTTCCCCAATATCTTAGCTTTGCTTCTTCTTCTTCTTCTTCTTCAAATGTATTCCAAGACTCTGAGCCTCTTAAGAGAGAGTCTTTTTGTTAA 546 0.3974 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIDQRGDAVSSLVYEATARVRDPVYGCVGAISYLQNQVTQLQMQLAVAQAEILSIHQMQQDPSNNNTTLLPSQLLDQDYSEKFLLLSSAENNNNYDFLPQYLSFASSSSSSSNVFQDSEPLKRESFC 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00650 181 Coils Coil 85 105 - -
Arst1g00650 181 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Arst1g00650 181 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Arst1g00650 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00650 Arst-Chr1 6524105 6525094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00650 3 140 AS2 family AT2G30130 76.812 5.52e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g00650 LOB 8.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00650 - - aip:107644491 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00650 1 6524105 6525094 Arst1g00650 1 6524105 6525094 ECH