Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00620 ATGAGATTGGAGAAGTGTTGGTTTTGTTCCTCAACGGTATATCCTGGTCATGGAATCCAGTTCGTTCGTAATGATGCCAAGATTTTTCGATTTTGTAGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATGGAAAGGATATGACACAGGATTCAACGTTTGAATTCGAGAGGAAGCGGAACAAACCTGAGAGATATGACAGGAACCTTGCTGAGAATGTGCTTAAGGCCATTCCTAAGATTGATAAGATCAGAGTCACCAGAGAGGAGAGACACCATAAGAATAGGTCCTTGCTTGAATCTTCTATTATGTATATAGTGTGGATTTGTGGAACTTTGGTATCATCCCCACCTCCTCACGAGAAACACGGACGACGGTGTTTCGCCATAAGAACAAGTCGGAGGCTGCCTCACAAAGACATTAGACCTCACGTCTAG 483 0.4306 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNKPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRSLLESSIMYIVWICGTLVSSPPPHEKHGRRCFAIRTSRRLPHKDIRPHV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00620 160 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Arst1g00620 160 SMART 4TRASH 6 44 IPR011017 -
Arst1g00620 160 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Arst1g00620 160 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Arst1g00620 160 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Arst1g00620 160 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Arst1g00620 160 PANTHER 60S RIBOSOMAL PROTEIN L24 1 111 IPR000988 -
Arst1g00620 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00620 Arst-Chr1 6161207 6166691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00620 1 111 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 81.982 3.49e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00620 K02896 - gmx:100778077 239.195