Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00596 ATGGCATTGGAAAATCTTCCTTTAATCATAAAGCTTAAAGTTTCTTCCAAACGAAAGCTTGACATAAATGAAAGCGTGGAGGTCAGGAGCATGGAGGAAGGCTTTCAGGGATCATGGCACCCGGGGAAAGTTGTCCATTCTGGGAGGCTGCAGCGCCATGTCAAATATGATAACATATTACTTGATGATGAGGTGAATTACCTTGTGGAAAAGGTGACTGTTCCGAAGGTATTGGATGGCGATAGCGACTCTTCAAATTGCAACATTCGTGGTTGGATTAGGCCGGTGCCTCCTAAGAGGGAATTTGAAAGTAGGGAACTTAAATTTGGTCTGTGTGTTGATGTGTACCATGAAGAAGCTTGGTGGGAAGGGGTTATATTTGATCACTGTGATGAAAAGCCAGAGAGGAGTGTATATTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCATCAAATGCGGATAACTTATGATTGGAATGAGGTTACTGGGGAGTGGCAGTCGAGAGGGAACTGGGTTTTTCTTGAAGTTCTTGAGGAGTATGAGAGGAAGATGTTTATTTCAGTTTCAGTGAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGACTTCGCCAAGATTAGGGAATGGACTTTTAATGAGAAAGAGTCATGGAAAGAAATGGTAATAGAGGTAGTTGATGATTACTTAAGGCTTACACTAGGAGAAGTTTGCTCCTCTTTAGATCTTCCAAGGAGTTTATTGAGAGAAACACCGGAGATGGAGTCGGTTGAATCTACAGCTAATGTTGACTTCAATCAGGAAGTTGATATGGCCAACTCTTTGGATGTTGCGAATTCTGCTGGCCAGTCGAGTAGCATTTGTATCACAACTGCTCATTGTGATGGTACCTCTGGTAATGTATTTGGTTCTGATGATGTGATTGCTGAACTCCCTATGGAAGAAGGTGAGTCATCAAATTTGTTGAACGCTGTTCAAAAGTGGCCTACCATTCAGGATCATGGGCTCAAAACTGTCCCTCAGAAAGAAGTTTCAATGCAGAAAGAACCGGCTACTGAAGTAATATTTAATGGAAGAAAACATACAAAGCTTCGCAGCTCAAATCAACAATGGGAACCTCTCAGATTGTCTGATGTTGAGTTATGTCCTGATGCTATTGAAGAATATGCACAGGCAGCTAAAAGGGCTTGCCCAGAAAAAGCACGAAAACATCTTGCGTATCTTGGATGGGAAATTGAGTGGACAAAGCATAAAGCAAGCTATAGGTACAGATATAGGTCGCCTGATAAAAAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACTCGGACATGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGAACCTATTCTTATTGATCAATCAGAAAAGAGTCAGGATCTAAATGATCAGAGTGCAATGCAACTTAGAGATGACAATCATCTTGCACCTATTCTTATTGATCAATCAGAAAAGAGTCATGATCTAAGTATTTTGCCACCAGTTGTGTCGTCTCCTGTGGATGAAGTTGCAGATGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATTTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGATTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCCCAACACTCCATGCAGCTTGCCTTTATTGTATTGAACAAAATGTTGCTAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTGGATTGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATAGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATGTACTCTCTTGGTTGATAGACAACAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCAGGCTCTGTTTAGCTGAAGGGAGAATAACCAGTGATGGAATCAAGTGTAATTGTTGTTTGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAACGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCAAAATATTTTCATAAAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGCTGATGAGGTCATTCCTGAAGGTGACTGGTTTTGCCCATCATGTCGATGTGCAGTTTGTGGCAAAAGGGACATAAAAGAAAAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAGATATAGTAAAAACTGGTTCTGCGGAAGCGACTGTAAAAAGATATATTTAGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCATTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCCGAGAGTAGTGATCCGTGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCTCAGTGATGCATGAATGTTTTGAGCCTCTAAAGGATCCTTCGTCTACCAGAGATCTCACGGAAGATGTTTTATTCAGTCGATGGTCAACACTTAATCGATTGAATTTCCATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTATGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGAACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTATGATGAATGAGCTTGAAAAGAGGCTCATGCAGTTGGGAGTGGAGAGGCTCGTTTTGCCTGCTGTTCCTAGTGTTGTAGATACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAAAGTTCGAGAGGTTACAGTTCTTGGACAATACCTTTTTAGATTTTCAGGATACCATCATGTGCCAGAAACTGCTGAAGATTCCATCTCCAGAGTCGGTTTTGTTAATAGGTTTGTAA 3372 0.4122 MALENLPLIIKLKVSSKRKLDINESVEVRSMEEGFQGSWHPGKVVHSGRLQRHVKYDNILLDDEVNYLVEKVTVPKVLDGDSDSSNCNIRGWIRPVPPKREFESRELKFGLCVDVYHEEAWWEGVIFDHCDEKPERSVYFPDLGDEMKIGVHQMRITYDWNEVTGEWQSRGNWVFLEVLEEYERKMFISVSVKQVWYDVRTKKDFAKIREWTFNEKESWKEMVIEVVDDYLRLTLGEVCSSLDLPRSLLRETPEMESVESTANVDFNQEVDMANSLDVANSAGQSSSICITTAHCDGTSGNVFGSDDVIAELPMEEGESSNLLNAVQKWPTIQDHGLKTVPQKEVSMQKEPATEVIFNGRKHTKLRSSNQQWEPLRLSDVELCPDAIEEYAQAAKRACPEKARKHLAYLGWEIEWTKHKASYRYRYRSPDKKGVYYSLSRVCKYVAQNSDMNPLPSQNDQSMMQLTADNHLEPILIDQSEKSQDLNDQSAMQLRDDNHLAPILIDQSEKSHDLSILPPVVSSPVDEVADEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLPTLHAACLYCIEQNVAKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLDCMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNRLPRRVLRSNKRVQKVSTPSLSHQKPQNVLSWLIDNNILLPRSKVSYKPKGRLCLAEGRITSDGIKCNCCLKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKTVEDHMTREAMAKPPKYFHKGENDNICSVCHYGGNLILCDQCPSSFHVTCLADEVIPEGDWFCPSCRCAVCGKRDIKEKEGDFLVCIQCEHKYHFKCLRTKYATNSRRYSKNWFCGSDCKKIYLGLHKLLGEPVSVGINNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALSVMHECFEPLKDPSSTRDLTEDVLFSRWSTLNRLNFHGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRIMMNELEKRLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTKFERLQFLDNTFLDFQDTIMCQKLLKIPSPESVLLIGL 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00596 1123 Pfam Agenet domain 24 98 IPR008395 -
Arst1g00596 1123 ProSiteProfiles Zinc finger PHD-type profile. 812 857 IPR019787 -
Arst1g00596 1123 SMART ring_2 815 854 IPR001841 -
Arst1g00596 1123 SMART ring_2 856 910 IPR001841 -
Arst1g00596 1123 SUPERFAMILY FYVE/PHD zinc finger 856 914 IPR011011 -
Arst1g00596 1123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 856 IPR013083 -
Arst1g00596 1123 SUPERFAMILY FYVE/PHD zinc finger 790 855 IPR011011 -
Arst1g00596 1123 CDD Tudor_Agenet_AtDUF_rpt1_3 26 98 - -
Arst1g00596 1123 SMART PHD_3 814 855 IPR001965 -
Arst1g00596 1123 SMART PHD_3 856 908 IPR001965 -
Arst1g00596 1123 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 965 1099 IPR000182 GO:0016747
Arst1g00596 1123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 857 910 IPR013083 -
Arst1g00596 1123 Pfam PHD-finger 814 856 IPR019787 -
Arst1g00596 1123 CDD NAT_SF 1005 1065 - -
Arst1g00596 1123 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 992 1093 IPR016181 -
Arst1g00596 1123 PANTHER PHD FINGER PROTEIN 12 514 1114 IPR042163 GO:0003714|GO:0045892
Arst1g00596 1123 MobiDBLite consensus disorder prediction 653 679 - -
Arst1g00596 1123 Gene3D - 965 1109 - -
Arst1g00596 1123 Pfam Tify domain binding domain 737 787 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00596 Arst-Chr1 5755609 5764311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00596 29 447 PHD Transcription Factor Family AT5G58610 32.388 3.18e-63 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst1g00596 Agenet 8.7e-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00596 - - aip:107644722 2139.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00596 1 5755609 5764311 Arst1g00596 1 5755609 5764311 ECH