Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00570 ATGAGGGTGATTTTGGTCATTTTGATTGTTGGATCAATTGGTGCTTTTTCTGGTTTATGCACTATTCTTTATTTCCTTTGGATTGGAGCTAAAAGACTATTCTTGAAGAAGAGAGATGTTGATAATTCAGAGCAACCTCAAAGAAATGATGATTCTGATGATGATGATGATGCCTATATTGAATTGGCTCCACTGCCGGCGAATCGCGCATCGAATGCAACATTAGGATCACTAAAGAGACATAGGAGTGTTGGTAGTTCATCGTCATCAAAGCATAATTTGGATAAGATTGAAAATTTTTCATTACATGAATTAGTCACAGCCACCGATAATTTTTCAAATGATAACAAGATAGGTTCTGGAAGCTTTGGCTCTGTATACAAAGGGAAGCTAGCCGATGATCGCGAAGTTGCCATCAAGAGAGGAGATATTGTTTCTAGCACAAAGAAGAAATTCCAAGAGAAGGAAATTGCATTTGATTCAGAATTGTCATTGTTATCGCGGCTTCATCACAAGCATCTTGTGAGACTAATAGGTTTCTGTGAGGAGAATGAAGAGAGGCTCTTGGTTTATGAGTACATGAGCAATGGATCAATCCATGAACATTTACATAACAAGAACAATGTTGAGAAAAATAGTAGCATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCATTGGATGCTGCCAGGGGAATTGAGTACATTCACAACTATGCTGTTCCACCAATTATCCATAGAGATATCAAATCCTCAAATATACTATTGGACTCAAATTGGAATGCTAAGGTTTCTGATTTCGGATTGTCCCTTATTTTGCCAGAGATGGAACAAGATTCGACTCCTATAAAGGCGGTTGGCACAGTTGGTTACATAGATCCAGAATACTATGAATTGAATGTGTTAACAACAAAAAGTGATGTGTATGGTTTAGGAGTGGTTATGTTGGAGCTTCTAACGGGAAAAAGAGTTGTGTTCAAATTAGATGATGAGAGTAGTCCTATGGGAATAGTAGAATATGCAAGGCCAAGAATAGCAAAAGGGGAATTATGCAGTATTTTGGACTATAGAATTGAAAAACCTAATGTTAACGAGCTTGAGGCTCTTAAGATTATGACTTTCATTGCTATACATTGTGTGAATTTGGAGGGAAAAGAAAGGCCTGAAATGGCTGAAGTTGTTGCTAACTTAGAGAGGGCATCGGCTTTTTTGGAGGGTAGTTCTAGTACCAGCTTCTCTATTGTTTCATGTTCTAATTAG 1260 0.3746 MRVILVILIVGSIGAFSGLCTILYFLWIGAKRLFLKKRDVDNSEQPQRNDDSDDDDDAYIELAPLPANRASNATLGSLKRHRSVGSSSSSKHNLDKIENFSLHELVTATDNFSNDNKIGSGSFGSVYKGKLADDREVAIKRGDIVSSTKKKFQEKEIAFDSELSLLSRLHHKHLVRLIGFCEENEERLLVYEYMSNGSIHEHLHNKNNVEKNSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNAKVSDFGLSLILPEMEQDSTPIKAVGTVGYIDPEYYELNVLTTKSDVYGLGVVMLELLTGKRVVFKLDDESSPMGIVEYARPRIAKGELCSILDYRIEKPNVNELEALKIMTFIAIHCVNLEGKERPEMAEVVANLERASAFLEGSSSTSFSIVSCSN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00570 419 Gene3D Transferase(Phosphotransferase) domain 1 194 410 - -
Arst1g00570 419 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Arst1g00570 419 ProSiteProfiles Protein kinase domain profile. 112 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00570 419 Pfam Protein kinase domain 113 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00570 419 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 80 408 IPR044815 GO:0004674
Arst1g00570 419 FunFam Serine/threonine-protein kinase-like protein CCR4 194 414 - -
Arst1g00570 419 SMART serkin_6 112 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00570 419 Gene3D Phosphorylase Kinase; domain 1 83 193 - -
Arst1g00570 419 CDD STKc_IRAK 118 399 - -
Arst1g00570 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Arst1g00570 419 SUPERFAMILY Protein kinase-like (PK-like) 87 398 IPR011009 -
Arst1g00570 419 FunFam Somatic embryogenesis receptor kinase 1 81 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00570 Arst-Chr1 5498669 5499928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00570 2 418 Receptor kinase-like Gene Family AT3G55950 58.080 4.04e-151 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Arst1g00570 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00570 - - adu:127747190 767.303