Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00568 ATGGCGAAAACGACGTCGTTACTCCTTAGCTCTCTTCTCCTCTTTGGAACCCTAGCTCTAATCCAGGCGAAGAAGGATTTGAAAGAAGTCACACACAAGGTTTACTTTGATGTTGAGATTGACGGAGAGCCTGCAGGTCGAATTGTAATGGGCCTTTTCGGAAAGACAGTTCCTAAGACAGCAGAAAACTTTCGAGCTCTTTGCACAGGTGAGAAGGGAACTGGAAAAAGTGGAAAGCCTCTTCATTTCAAAGGTAGCTCATTCCACAGGATCATACCTAGCTTTATGATCCAGGGAGGTGACTTTACACATGGGAATGGAATGGGTGGAGAATCAATTTATGGAGAGAAGTTTGCTGACGAGAACTTTAAGCTAAAGCACACTGGACCAGGACTTTTATCAATGGCAAACGCTGGTCCTGATACCAATGGTTCACAGTTCTTCATTACTACTGTTACAACTAGCTGGTTGGATGGAAAGCATGTTGTTTTCGGAAAGGTGCTTTCTGGAATGGATGTTGTATACAAGATTGAAGCTGAAGGAAAACAAAGTGGCACTCCCAAGAGCAAGGTCACAATTGCTGACAGTGGTGAACTACCTCTATAA 606 0.4373 MAKTTSLLLSSLLLFGTLALIQAKKDLKEVTHKVYFDVEIDGEPAGRIVMGLFGKTVPKTAENFRALCTGEKGTGKSGKPLHFKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGKQSGTPKSKVTIADSGELPL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00568 201 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 83 100 IPR020892 GO:0003755|GO:0006457
Arst1g00568 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 174 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 52 67 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 88 100 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 158 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 CDD cyclophilin_ABH_like 32 197 - -
Arst1g00568 201 FunFam Peptidyl-prolyl cis-trans isomerase 27 200 - -
Arst1g00568 201 Gene3D - 20 200 IPR029000 -
Arst1g00568 201 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 33 199 - -
Arst1g00568 201 PIRSF Peptidylpro_ismrse 18 200 IPR024936 GO:0003755
Arst1g00568 201 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 36 196 IPR002130 GO:0000413|GO:0003755
Arst1g00568 201 SUPERFAMILY Cyclophilin-like 29 199 IPR029000 -
Arst1g00568 201 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 198 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00568 Arst-Chr1 5462195 5464991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00568 46 178 U-box Gene Family AT5G67530 46.269 2.27e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00568 K01802 - gmx:100792140 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00568 1 5462195 5464991 Arst1g00568 1 5462195 5464991 ECH