Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00547 ATGGCAGGCATAGCAAGTTTCTTCAACAAGTTCCTGTCTATGTTCATCATCCTCATTGTTCACCTTGGTTGCTTCATCTTCACCACCAGCTACACATCAACAACAACAAAGCAAGAAAACAACAACAACAATAATAATAATTTCTTGCAACCATCTTCAAAGAAACGCAAAATCTCACCTTCATCACACTCACAACCCTCTTCACCTTCCCACCCAAAATTCAAAACCCACAAAGCACTCTCTTCTTCTTGGCATTTCATCAAACACTTGTTCACCGCCACCACTGCCACCACAACCAGCAACTCCGCCTCCGCCACCGTTACCGCCGCCAGGTCCTCTCAGAATTCTCTTATTTCCTCATTGCAATCCGACCCGAGTTCCATGAACGTTCCTCGTCGGAACTTGCCCGGATCATTGGTCCGACCCGAATCTGAAATCTCCGGCGAGTTGGACAGCGGCCTCTTCTTCCCTCTCCGGAATGATATATTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAGCCGCTCCTACTGGAGCAGCATCAATCTACGAAGCACGCGGTGTCGGAGCTACCCGGATCCGACCCCGGTCACAACATAGTCCAGATCATATTCAAGTCGGGTTGGCCCGAGATCCGAAAGTTCCCGATCATAACCCGGATCCTTAAGATCCATAACAGCCAAAAGATTCTCTCGCGGTTCGAGGAGTATCGCGAGGCTGTCAAGGAGAGGGCCGCGCTTCACGGCGGCATAATGTCCACGCGCCGCCGTGACGAGCGGTGCCTCGCCGATGGCAATGAGCTTATGAGGTTTCACTGTTCAACTTTTTTATGTGATTTGGGACTTAATGGGAATTCTTCAATTTGTTCGCAACAATTTTGTAATATTTGTGGGATAATTAAATCAGGGTTTTCCCCGAAATTAGATGGAATTTCCACGTTGGCATCCAGCTGGAGGGCACACGTGTCAATCCCAGAAGATATTGAAAGTGAATTTCGCTTCATGAATGTAAAGCGAGCCATGCTGGTTTGTAGAGTTATTGCGGGTCGGGTCGGATCGGATTCAGACGAAGCTGAAAAGGAGGATGGTGGGAGTTTCGACTCCGTGATGGCACGTGGCGGTGACAGCGGAGTGTACACTCGGCTAGACGAGGAGGAGCTTTTGGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTGTGA 1218 0.4943 MAGIASFFNKFLSMFIILIVHLGCFIFTTSYTSTTTKQENNNNNNNNFLQPSSKKRKISPSSHSQPSSPSHPKFKTHKALSSSWHFIKHLFTATTATTTSNSASATVTAARSSQNSLISSLQSDPSSMNVPRRNLPGSLVRPESEISGELDSGLFFPLRNDIFPCTACGEIFQKPLLLEQHQSTKHAVSELPGSDPGHNIVQIIFKSGWPEIRKFPIITRILKIHNSQKILSRFEEYREAVKERAALHGGIMSTRRRDERCLADGNELMRFHCSTFLCDLGLNGNSSICSQQFCNICGIIKSGFSPKLDGISTLASSWRAHVSIPEDIESEFRFMNVKRAMLVCRVIAGRVGSDSDEAEKEDGGSFDSVMARGGDSGVYTRLDEEELLVFNPRAVLPCFVIVYSV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00547 405 ProSitePatterns Zinc finger C2H2 type domain signature. 165 186 IPR013087 -
Arst1g00547 405 MobiDBLite consensus disorder prediction 119 133 - -
Arst1g00547 405 MobiDBLite consensus disorder prediction 35 75 - -
Arst1g00547 405 Gene3D - 187 404 - -
Arst1g00547 405 ProSiteProfiles Zinc finger C2H2 type domain profile. 163 191 IPR013087 -
Arst1g00547 405 SUPERFAMILY ADP-ribosylation 188 404 - -
Arst1g00547 405 MobiDBLite consensus disorder prediction 119 140 - -
Arst1g00547 405 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 80 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00547 Arst-Chr1 5167023 5168973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00547 84 405 C2H2 Transcription Factor Family AT2G29660 55.891 3.66e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst1g00547 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00547 - - aip:107608029 702.205