Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00518 ATGAATAAAACAAAGAAAGTCCCCATTACTTTACATAATAATAATAATGTTGGACACCAAAAACATCATAAGAAGACTCATCATCATGCTTCTTTGCTGACAAATTTTAAGTCTGCTGTGATGAAATGTGCAAGCTTTTTTGCATTGTTTCTTTCTGGAAAAAGAAACACACAAGAATCAAAGGTTGTTGAAGACAGAAAGAGTACAAACAAAGTCAAAGGAGCATCATCTTCATCTGATTTATCATCTGATAGCAACAAGAGTTCATCCTCAAAATTGAAGTTTTCACATTCCTATGGATCATCTAGCACTTCAAATACTCAGCTTGGAACTGCAGGGAACTTCTCCTTTGAAGAAATCTGCAAGGCAACAGCAAAATTCTCTGCAGCTAATAAGATTGGGGAAGGTGCCTTTGGAACTGTTTATAAGGGAAAGCTTAATGATGGAACTCTTGTTGCCGCAAAGCGCGCCAACAAGGATGTAGAAAACAAGAACTTAGCTGAGTTCAAGAATGAAGTATCCACCTTGTCAAAGATTGAGCATCTGAATCTTGTGAGGCTGTATGGATATTTGGAGCATGCAGATGAAAAGATTATTGTTGTTGAATATGTTAATAATGGATCACTCCGGGAACATCTAGATGGTACAAGGGGTGATGGGCTAGAAATTGGTGAGCGTTTAGACATAGCAATTGATATAGCTCATGCAGTTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAACATCTTGCTTACTGACAAACTAAGGGCTAAAGTGGCCGACTTTGGTTTCGCCCGGCTGGCTGCTGAAGACCCTTCTGCCACCCATGTTTCAACAAAACTTAAAGGAACAGCAGGCTACATTGATCCTGATTACATGAGATCTTACAAGCTTTCTGAGAAGAGTGATGTATATTCCTTCGGCGTGTTGCTTGTTGAGATGGTTACCGGACGACATCCAGTTGAGCCGAGGAGACCTCTCAGTGAGAGAGTTACAATTAAATGGGCACTGCAGATGCTGAAACAAGGAGAAGTTGTGATCGCCATGGATCCGAGGCTGCGAAGAAGTCCGGCCGCGAAAAAGGCCGTAGAGAAGGTTCTAAAGCTAGCTCACCAGTGCCTTGCACCTTCAAGACAATCAAGGCCAACCATGAAGACATGTGCTGAGGTTTTATGGGGTATCCGGAAAGATTTTAGAGACAAAACATCTTCTCATCTTAGCCATGATTCTCATCATTCTGCTAATTATCCTCATAGAGATGCCATGAATGATAGGCATAAGTTATTTGATATCGAAGGTGACAATGACCGTAAATTTGTATCTGCATAG 1356 0.4056 MNKTKKVPITLHNNNNVGHQKHHKKTHHHASLLTNFKSAVMKCASFFALFLSGKRNTQESKVVEDRKSTNKVKGASSSSDLSSDSNKSSSSKLKFSHSYGSSSTSNTQLGTAGNFSFEEICKATAKFSAANKIGEGAFGTVYKGKLNDGTLVAAKRANKDVENKNLAEFKNEVSTLSKIEHLNLVRLYGYLEHADEKIIVVEYVNNGSLREHLDGTRGDGLEIGERLDIAIDIAHAVTYLHMYTDHPIIHRDIKASNILLTDKLRAKVADFGFARLAAEDPSATHVSTKLKGTAGYIDPDYMRSYKLSEKSDVYSFGVLLVEMVTGRHPVEPRRPLSERVTIKWALQMLKQGEVVIAMDPRLRRSPAAKKAVEKVLKLAHQCLAPSRQSRPTMKTCAEVLWGIRKDFRDKTSSHLSHDSHHSANYPHRDAMNDRHKLFDIEGDNDRKFVSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00518 451 Gene3D Phosphorylase Kinase; domain 1 84 203 - -
Arst1g00518 451 Pfam Protein tyrosine and serine/threonine kinase 130 400 IPR001245 GO:0004672|GO:0006468
Arst1g00518 451 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 204 414 - -
Arst1g00518 451 MobiDBLite consensus disorder prediction 1 16 - -
Arst1g00518 451 SUPERFAMILY Protein kinase-like (PK-like) 101 403 IPR011009 -
Arst1g00518 451 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 409 - -
Arst1g00518 451 MobiDBLite consensus disorder prediction 1 29 - -
Arst1g00518 451 Coils Coil 152 172 - -
Arst1g00518 451 MobiDBLite consensus disorder prediction 72 107 - -
Arst1g00518 451 ProSiteProfiles Protein kinase domain profile. 127 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00518 451 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Arst1g00518 451 SMART serkin_6 127 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00518 451 MobiDBLite consensus disorder prediction 58 107 - -
Arst1g00518 451 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 90 203 - -
Arst1g00518 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Arst1g00518 451 CDD STKc_IRAK 133 400 - -
Arst1g00518 451 Gene3D Transferase(Phosphotransferase) domain 1 204 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00518 Arst-Chr1 4950511 4953928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00518 95 404 Receptor kinase-like Gene Family AT4G39110 41.214 5.39e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Arst1g00518 PK_Tyr_Ser-Thr 5.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00518 - - gmx:100815871 580.482