LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g00482	ATGGCAAATGCAGATGCAGGTGAATCTTCTGAAACCAACAAGAGTAACTACGACATTTTCTTGAGCTTTAGGGGTGAGGACACGCGTCACACCTTCACAGGTTATCTCTACGAAGCTTTGTCCCGCAAGGGAATCAAAACCTTCATGGACAATGAGAATCTCAGGATAGGCGACTCTATTGGACCTAATCTTCTTAAAACAATTGAACATTCAAGGATTTCGATTGTTGTTTTCTCTGAAAATTATGCTGCTTCCAAGTGGTGCCTTGATGAACTCGTGAAGATCCTCGAGTGCCGGAACGAGAAGAATATGCTCTTGTTTCCAATCTTCTACAAAGTAGCTCCCTCTGATGTACGGTATCAGAGAAAGAGTTATGAAAAAGCCATGGCTGCTCACGAACTTAGGTATGGTTGTGGCTCTGAGAAGGTGAAGAAATGGAGGTCAGCATTGTTTGATGTATCCCAAATTTCAGGACATGTTTTGAGAGAGGGGTATGAATACAAGTTCATTCAAGATATTGTTTGCAAGGCCGATGCTAAATTACTATCTTCAAAACAGTTACACATTGATGAGGACATGGTTGGGCTGCAGTTTAAAGTTGAGGAAGTGAAGTCACTTCTAGATCTCAAGTCTAGTGACAGCACTTCCATGGTGGGGATTTATGGAATTGGTGGTATTGGCAAAACAACACTTGCGAAAGCTTTGTATAACACCATCTGCAACCAGTTTGAAGGAGCTTGTTTTCTCTTCGATGTCAGAAAAACTTCAAATCAAGAGAAGGGGCAAGTGCATCTGCAACAAACTCTCTTGTTGGAACTGTTGGAGGAGGGAAAAATCAAGTTTAGCAGCGTAGAAAAAGGGATCTCTATATTGAAAGACAGACTTGCTGGAAAAAAAGTCCTTGTAGTCCTTGATGATGTTGACAACATGGAACAATTAAGAGCATTGGCAGGAAAATGTGGTTGGTTTGGTTCCGGGAGCAGGATTATTATAACAACAAGGAATAAATATTTGCTAACGGCTCATCAGGTCAAAAGCATTTATGAGATGAAATTGTTAAATGTCTACGAATCTCTTGAGCTCTTTTGTCTGAATGCATTCAAAATGAGTAGTCCTGCAACAAACTATGATGACCTTTCCATTAGAGCAATAGGGTATGCCAAAGGGCTTCCATTGGCTTTAAAAGTTATAGGCTCTAATTTGATCGGCAAAGATTTAAATGAGTGGAAGTCTGCATTGAAGAAATATAAGCGGAATCCTCATAGAGATATTCAAAGCATTTTAAGAATAAGCTATGATAGTTTAGAAAGCAATGAAAAGGACATTTTTCTTGACATCGCGTGCTTCTTCAATGGGCAGAGGTTGGAGTATGTGAAAAGAATACTTGATGGGTGTGAGTTCTACACAGAAGATGGTCTTAGAATACTTATTGATAGATCTCTCATAACAGTTGAAGATGGTCACTTGAGGATGCATGATCTAATACAGGATATGGGTAGAGATGTTGTAAAGCAGGAGGCGCCAAAAGATGCCGCTGAACGTAGTAGATTATGGCTTAGAGAAGATGTCCTTCAAGTACTAACTGAAAATAGAGGAAGTAGCAAAATTGAAGGGATAAAGCTTGATTGCCTGGAAGAAAATTTGATTTCTAGAGCCTTTGAGGAGATGAAGAAGCTTAGAATTCTCATCGTGCGGAACACAAGCTTCTCATTCGGACGTATTCATCTACCAAACCAGTTAAGGCTGCTTGATTGGAAGGGTTTCCCTTCAAAATCTTTCCCACCAGATTTTTATCCCAAGAAAATTGCTGCCTTCAACTTACGTTGCAGTCCTCTTGTATTGAAAAAACCATTTCAGAAATTTGAGCATTTGACCTACATGAATTTCTCCTATTGTCAATCCATCACTAGAATTCCTGATGTTTCTGGAGCAAAAAATTTAACAGAATTGATACTTAATAAATGCAAGAAACTGGTAAAGGTTGATGAATCGGTCGGTTTTCTCCCTAACCTTGTTTACTTAAGTGCTTCCGGATGCATTCAACTAAGAAGCTTTCTGCCAAGAATCTTTTTGCCGTCTCTTGAATTCCTTTCCTTTGACATGTGTAGAAGACTTGCATTCTTTCCAGACATAGTGGGAACAATGGATAAGCCATTAAAAATTTGTATGAAAGATACTGCTATTAGAGAGCTTCCACCTTCCTTTGCCAATCTTAGTGGACTTGGTTACTTGGATATGTCAAGTTGTAAGCAACTCCAAAAACTACCAAGTGAGCTATTTGTGTTGCCAAATTTTGTCACATTAAAAATTGGAGGGTGCCCTCAACTTCGGGAATCATTTACACAGTTCAAAGGATGCGATTCTAGAGCAGAGTGCTGGCCAAATCTAGAGACTTTGCATTTCTGCAATGCCTGTCTATCAGATGAAGATCTTTATATGATTGTACATAGTTTCCCAAAGCTGATAGAATTAAATGTGTCATCGAACTATTTTGTATCAATCCCAGCGTACATTAAGGAATCTATTAACTTGACAACTCTTGATGTGAGTTATTGCCTGAAGCTACAGCAAATTCCAGCACTGCCCTCTAGTATTCAAAAAGTAGATGCAAGACACTGCAATTCCTTAACAGCTGACTCATCAAGTACGCTATGGTCACAGATGCCCAGAGAGATTGATAGATTAGAAGTTGCGATGCCCGAAACAGAGATTCCAGAATGGTTGGACTATCATGGCCATGGTGAGAGTCCCATTTTCTGGGCTCGTGGCAAGTTCCCTGTTGTGGCCTTGGCCTTTGTGGTCGACGAAATAAACTATCAAGTTGTTAACCTGCACTTGTTCATTGACAATGAGCATGTAACTGTTCAAAGCCAACATCTTATTTTCAATATAGCAGAAGATCATGTGCTGTTGTTCGACCTGCGTGTTTTATTCAGAGTTGAGGAGTGGAAGAGGCTTGATGCTCGTTTCCAACATGATAATTGTTGGAAGTCCATCCAGGTGAAGTGTGAACCAGACATCATCCTGAAAGACTGGGGGGTTCATGTATATAAGAAAGAAACAAACATGGATGATATCCAATTCTCATGTCCATATCCAGCTACCTTAGGCTCTGGATCGTGTATGGGTTTAAACTTGATATGGGTACCAAGAGATTGGGTGGAGGAAGGAAGTGCAACAGGAACAGATTCCTCAAGTGATGTGGAAGAATTGGATACTATTCTACAAGTGAAAGAAGCATCATGCTCAAGTCCTTGTGCTGTCTCTTGCAGCTGCTACTGCTCAGCCGGATCGTCGTCTTTCAAGAAACTTCTTGGTTTTAAGTTCAGAAGACGATTGTCGATAAATATGATCAGTCGATGGCCGGAAGATGATGTTGATGATATTGATTTTAGGAACCAAGAGCCTCTTTCCTTCTCAGAGAACCTCCAAACTGTGATGGAAAACTTGAGGAGGTTGGCGGCTCCAAGACAAAAGAAAGGCATGAGCAACGGAGACCATGACAATGATAGCTTGAAATGGCTGGCTGAGACAGAGATATTAAGTGATGGCGAGTACGAGGACGAAGAGGAAGAGTCAGATTCAGAAGCATAG	3594	0.4048	MANADAGESSETNKSNYDIFLSFRGEDTRHTFTGYLYEALSRKGIKTFMDNENLRIGDSIGPNLLKTIEHSRISIVVFSENYAASKWCLDELVKILECRNEKNMLLFPIFYKVAPSDVRYQRKSYEKAMAAHELRYGCGSEKVKKWRSALFDVSQISGHVLREGYEYKFIQDIVCKADAKLLSSKQLHIDEDMVGLQFKVEEVKSLLDLKSSDSTSMVGIYGIGGIGKTTLAKALYNTICNQFEGACFLFDVRKTSNQEKGQVHLQQTLLLELLEEGKIKFSSVEKGISILKDRLAGKKVLVVLDDVDNMEQLRALAGKCGWFGSGSRIIITTRNKYLLTAHQVKSIYEMKLLNVYESLELFCLNAFKMSSPATNYDDLSIRAIGYAKGLPLALKVIGSNLIGKDLNEWKSALKKYKRNPHRDIQSILRISYDSLESNEKDIFLDIACFFNGQRLEYVKRILDGCEFYTEDGLRILIDRSLITVEDGHLRMHDLIQDMGRDVVKQEAPKDAAERSRLWLREDVLQVLTENRGSSKIEGIKLDCLEENLISRAFEEMKKLRILIVRNTSFSFGRIHLPNQLRLLDWKGFPSKSFPPDFYPKKIAAFNLRCSPLVLKKPFQKFEHLTYMNFSYCQSITRIPDVSGAKNLTELILNKCKKLVKVDESVGFLPNLVYLSASGCIQLRSFLPRIFLPSLEFLSFDMCRRLAFFPDIVGTMDKPLKICMKDTAIRELPPSFANLSGLGYLDMSSCKQLQKLPSELFVLPNFVTLKIGGCPQLRESFTQFKGCDSRAECWPNLETLHFCNACLSDEDLYMIVHSFPKLIELNVSSNYFVSIPAYIKESINLTTLDVSYCLKLQQIPALPSSIQKVDARHCNSLTADSSSTLWSQMPREIDRLEVAMPETEIPEWLDYHGHGESPIFWARGKFPVVALAFVVDEINYQVVNLHLFIDNEHVTVQSQHLIFNIAEDHVLLFDLRVLFRVEEWKRLDARFQHDNCWKSIQVKCEPDIILKDWGVHVYKKETNMDDIQFSCPYPATLGSGSCMGLNLIWVPRDWVEEGSATGTDSSSDVEELDTILQVKEASCSSPCAVSCSCYCSAGSSSFKKLLGFKFRRRLSINMISRWPEDDVDDIDFRNQEPLSFSENLQTVMENLRRLAAPRQKKGMSNGDHDNDSLKWLAETEILSDGEYEDEEEESDSEA	1197

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g00482	1197	Gene3D	Ribonuclease Inhibitor	502	720	IPR032675	-
	Arst1g00482	1197	Gene3D	Ribonuclease Inhibitor	721	897	IPR032675	-
	Arst1g00482	1197	ProSiteProfiles	TIR domain profile.	15	181	IPR000157	GO:0007165
	Arst1g00482	1197	Pfam	TIR domain	16	176	IPR000157	GO:0007165
	Arst1g00482	1197	PRINTS	Disease resistance protein signature	387	401	-	-
	Arst1g00482	1197	PRINTS	Disease resistance protein signature	736	752	-	-
	Arst1g00482	1197	PRINTS	Disease resistance protein signature	217	232	-	-
	Arst1g00482	1197	PRINTS	Disease resistance protein signature	294	308	-	-
	Arst1g00482	1197	Pfam	NB-ARC domain	199	436	IPR002182	GO:0043531
	Arst1g00482	1197	Gene3D	-	353	436	IPR042197	-
	Arst1g00482	1197	SUPERFAMILY	Toll/Interleukin receptor TIR domain	8	158	IPR035897	-
	Arst1g00482	1197	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	187	446	IPR027417	-
	Arst1g00482	1197	SUPERFAMILY	L domain-like	543	878	-	-
	Arst1g00482	1197	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	764	IPR044974	GO:0006952
	Arst1g00482	1197	Gene3D	-	9	180	IPR035897	-
	Arst1g00482	1197	Gene3D	-	181	347	IPR027417	-
	Arst1g00482	1197	SUPERFAMILY	"Winged helix" DNA-binding domain	423	527	IPR036390	-
	Arst1g00482	1197	FunFam	Disease resistance protein (TIR-NBS-LRR class)	13	183	-	-
	Arst1g00482	1197	SMART	till_3	16	156	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g00482	Arst-Chr1	4562125	4567674	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g00482	12	792	WRKY Transcription Factor Family	AT4G12020	31.716	1.42e-101	353

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g00482	-		-	aip:107611979	2157.1