Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00462 ATGAATTCTTCGAATGGAAGGCCAACAAACAAGTTTGAGGATCAAGTTCCTTTTAGCCCTGAAATAGCTTATCACCAGCCAGAATCTACTATGGCTGCACGTGGATCACATCCCGGAGAATCGCTCACTGTTTGCAGCGAAACATTGGGGGGCATTATTTACAGGAGCATACGGCTTGTGGTTTTCTCGAACAGACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCGATTCTTGTTCAGAAATTGACTGGTCATCATGGCTGGGTCTTCGGTCTTAGTTTACTGGGGATAATGCCTCTGGCAGAGCGGCTCGGTTATGCCACGGAGCAACTTGCATTTTACACTGGAGATACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTAATAATCTCGTTATATGCCCTGAAAAGTGGATTGACACGAGTAGTCCAGCTTTCATTGCTGGGTTCAATTTTGTCAAACATGTTGCTTGTGCTTGGATGTGCATTCTTAAGTGGTGGTATTGTTTTCAGCAAGAAGGAACAAGTATTTAACAAGGCAGCTGCTACGGTGAATTCAGGATTGCTGCTTATGGCAGTTATGGGCCTACTTTTTCCTGCTGTTCTTCATTATACACGAACTGAGGTGCACTTCGGGAAGTCAGAACTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACTTATTTTTCCAGTTGAGAAATCAAAGTGGTCTCTATATCTCTGCGAACGAGGAAGAGAGAGAGACAGGCGACAACTCAAATGACGATGAATCTCCTGAAATTTCTAAATGGGAATCAATAATCTGGCTTTTGGTTATGACTGCTTGGATATCAATTCTTTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTAATTCATGGAACATACCAGTAACATTCATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCAGCAGAACATGCTAGTGCTATCATGTTTGCCATGAAAGATAAATTAGACATCTCCTTGGGAGTAGCGATAGGGTCGTCCACGCAGATATCTATGTTCGTTATACCATTTTGTGTTGTTATGGGGTGGATAATGGGGCAACCATTGGACCTGAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTTGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAGGGGGTAATGCTTGTGCTTTGCTATCTGATAGTAGCAGCTAGTTTTTATGTACATGTAGATTCCAATTCTGAAGACCAGCCTGTTCCCTAA 1302 0.4286 MNSSNGRPTNKFEDQVPFSPEIAYHQPESTMAARGSHPGESLTVCSETLGGIIYRSIRLVVFSNRLNLLMPFGPLAILVQKLTGHHGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISLYALKSGLTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFSKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTRTEVHFGKSELALSRFSSCVMLVAYAAYLFFQLRNQSGLYISANEEERETGDNSNDDESPEISKWESIIWLLVMTAWISILSEYLVGAIEGASNSWNIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVMGWIMGQPLDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGVMLVLCYLIVAASFYVHVDSNSEDQPVP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00462 433 FunFam Vacuolar cation/proton exchanger 265 421 - -
Arst1g00462 433 FunFam Vacuolar cation/proton exchanger 117 256 - -
Arst1g00462 433 Gene3D - 115 256 IPR044880 -
Arst1g00462 433 Gene3D - 264 421 IPR044880 -
Arst1g00462 433 NCBIfam calcium/proton exchanger 58 419 - -
Arst1g00462 433 NCBIfam calcium/proton exchanger 70 420 IPR004798 GO:0006816|GO:0015369
Arst1g00462 433 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst1g00462 433 Pfam Sodium/calcium exchanger protein 88 243 IPR004837 GO:0016020|GO:0055085
Arst1g00462 433 Pfam Sodium/calcium exchanger protein 277 418 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00462 Arst-Chr1 4383890 4388714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00462 19 429 Antiporters AT1G55730 70.316 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00462 K07300 - gmx:100799276 700.279