Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00461 ATGGAATCTCGAGTTGAAGTGAAACAACCAACACTGAATACATCCGGATTTTCAGATGACTTGTCTGAGACTCGCAAGATGAATTCTTCGAATGGAAGGCCAACAAACAAGTTTGAGGATCAAGTTCCTTTTAGCCCTGAAATAGCTTATCACCAGCCAGAATCTACTATGGCTGCACGTGGATCACATCCCGGAGAATCGCTCACTGTTTGCAGCGAAACATTGGGGGGCATTATTTACAGGAGCATACGGCTTGTGGTTTTCTCGAACAGACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCGATTCTTGTTCAGAAATTGACTGGTCATCATGGCTGGGTCTTCGGTCTTAGTTTACTGGGGATAATGCCTCTGGCAGAGCGGCTCGGTTATGCCACGGAGCAACTTGCATTTTACACTGGAGATACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTAATAATCTCGTTATATGCCCTGAAAAGTGGATTGACACGAGTAGTCCAGCTTTCATTGCTGGGTTCAATTTTGTCAAACATGTTGCTTGTGCTTGGATGTGCATTCTTAAGTGGTGGTATTGTTTTCAGCAAGAAGGAACAAGTATTTAACAAGGCAGCTGCTACGGTGAATTCAGGATTGCTGCTTATGGCAGTTATGGGCCTACTTTTTCCTGCTGTTCTTCATTATACACGAACTGAGGTGCACTTCGGGAAGTCAGAACTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACTTATTTTTCCAGTTGAGAAATCAAAGTGGTCTCTATATCTCTGCGAACGAGGAAGAGAGAGAGACAGGCGACAACTCAAATGACGATGAATCTCCTGAAATTTCTAAATGGGAATCAATAATCTGGCTTTTGGTTATGACTGCTTGGATATCAATTCTTTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTAATTCATGGAACATACCAGTAACATTCATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCAGCAGAACATGCTAGTGCTATCATGTTTGCCATGAAAGATAAATTAGACATCTCCTTGGGAGTAGCGATAGGGTCGTCCACGCAGATATCTATGTTCGTTATACCATTTTGTGTTGTTATGGGGTGGATAATGGGGCAACCATTGGACCTGAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTTGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAGGGGGTAATGCTTGTGCTTTGCTATCTGATAGTAGCAGCTAGTTTTTATGTACATGTAGATTCCAATTCTGAAGACCAGCCTGTTCCCTAA 1380 0.4283 MESRVEVKQPTLNTSGFSDDLSETRKMNSSNGRPTNKFEDQVPFSPEIAYHQPESTMAARGSHPGESLTVCSETLGGIIYRSIRLVVFSNRLNLLMPFGPLAILVQKLTGHHGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISLYALKSGLTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFSKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTRTEVHFGKSELALSRFSSCVMLVAYAAYLFFQLRNQSGLYISANEEERETGDNSNDDESPEISKWESIIWLLVMTAWISILSEYLVGAIEGASNSWNIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVMGWIMGQPLDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGVMLVLCYLIVAASFYVHVDSNSEDQPVP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00461 459 NCBIfam calcium/proton exchanger 84 445 - -
Arst1g00461 459 Pfam Sodium/calcium exchanger protein 303 444 IPR004837 GO:0016020|GO:0055085
Arst1g00461 459 Pfam Sodium/calcium exchanger protein 114 269 IPR004837 GO:0016020|GO:0055085
Arst1g00461 459 MobiDBLite consensus disorder prediction 1 38 - -
Arst1g00461 459 NCBIfam calcium/proton exchanger 96 446 IPR004798 GO:0006816|GO:0015369
Arst1g00461 459 Gene3D - 141 282 IPR044880 -
Arst1g00461 459 Gene3D - 290 447 IPR044880 -
Arst1g00461 459 MobiDBLite consensus disorder prediction 1 39 - -
Arst1g00461 459 FunFam Vacuolar cation/proton exchanger 291 447 - -
Arst1g00461 459 FunFam Vacuolar cation/proton exchanger 143 282 - -
Arst1g00461 459 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 58 450 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00461 Arst-Chr1 4383890 4388714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00461 45 455 Antiporters AT1G55730 70.316 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00461 K07300 - gmx:100799276 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00461 1 4383890 4388714 Arst1g00461 1 4383890 4388714 ECH