Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00460 ATGGAATCTCGAGTTGAAGTGAAACAACCAACACTGAATACATCCGGATTTTCAGATGACTTGTCTGAGACTCGCAAGATGAATTCTTCGAATGGAAGGCCAACAAACAAGTTTGAGGATCAAGTTCCTTTTAGCCCTGAAATAGCTTATCACCAGCCAGAATCTACTATGGCTGCACGTGGATCACATCCCGGAGAATCGCTCACTGTTTGCAGCGAAACATTGGGGGGCATTATTTACAGGAGCATACGGCTTGTGGTTTTCTCGAACAGACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCGATTCTTGTTCAGAAATTGACTGGTCATCATGGCTGGGTCTTCGGTCTTAGTTTACTGGGGATAATGCCTCTGGCAGAGCGGCTCGGTTATGCCACGGAGCAACTTGCATTTTACACTGGAGATACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTAATAATCTCGTTATATGCCCTGAAAAGTGGATTGACACGAGTAGTCCAGCTTTCATTGCTGGGTTCAATTTTGTCAAACATGTTGCTTGTGCTTGGATGTGCATTCTTAAGTGGTGGTATTGTTTTCAGCAAGAAGGAACAAGTATTTAACAAGGCAGCTGCTACGGTGAATTCAGGATTGCTGCTTATGGCAGTTATGGGCCTACTTTTTCCTGCTGTTCTTCATTATACACGAACTGAGGTGCACTTCGGGAAGTCAGAACTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACTTATTTTTCCAGTTGAGAAATCAAAGTGGTCTCTATATCTCTGCGAACGAGGGAGCATCTAATTCATGGAACATACCAGTAACATTCATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCAGCAGAACATGCTAGTGCTATCATGTTTGCCATGAAAGATAAATTAGACATCTCCTTGGGAGTAGCGATAGGGTCGTCCACGCAGATATCTATGTTCGTTATACCATTTTGTGTTGTTATGGGGTGGATAATGGGGCAACCATTGGACCTGAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTTGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAGGGGGTAATGCTTGTGCTTTGCTATCTGATAGTAGCAGCTAGTTTTTATGTACATGTAGATTCCAATTCTGAAGACCAGCCTGTTCCCTAA 1245 0.4321 MESRVEVKQPTLNTSGFSDDLSETRKMNSSNGRPTNKFEDQVPFSPEIAYHQPESTMAARGSHPGESLTVCSETLGGIIYRSIRLVVFSNRLNLLMPFGPLAILVQKLTGHHGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISLYALKSGLTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFSKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTRTEVHFGKSELALSRFSSCVMLVAYAAYLFFQLRNQSGLYISANEGASNSWNIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVMGWIMGQPLDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGVMLVLCYLIVAASFYVHVDSNSEDQPVP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00460 414 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 58 278 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst1g00460 414 FunFam Vacuolar calcium ion transporter 142 401 - -
Arst1g00460 414 Gene3D - 141 402 IPR044880 -
Arst1g00460 414 MobiDBLite consensus disorder prediction 1 39 - -
Arst1g00460 414 Pfam Sodium/calcium exchanger protein 114 269 IPR004837 GO:0016020|GO:0055085
Arst1g00460 414 Pfam Sodium/calcium exchanger protein 281 399 IPR004837 GO:0016020|GO:0055085
Arst1g00460 414 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00460 Arst-Chr1 4383889 4388714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00460 45 410 Antiporters AT1G55730 63.990 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00460 K07300 - gmx:100799276 630.943