Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00456 ATGACGGCAATACTCAGCCTATCCACCGTTCCCGCTGTCAACTTCTCCTTCTCTAGCAACAACCGAGCTTCCAACGAAAGATTCCACCGCCGTAGTCCGATCCGCGCCGTCGCTTCTCCGGTGCCGGCCACATCGGCTAGCCTCTACGAGGTTTTGAGAATCGAGCAGGATGCGTCGCTGACGGAGATCAAGTCTGCCTTCAGGAGCCTGGCGAAGCTCTACCACCCCGACGTTGCGAGCGTGAGGCGGTTGCCGGATTCTGACGGCGACTTCATCGTGATACGGAACGCGTACGAGACGCTATCGGATTCTTCAGCGAGAGCTATGTACGATCTGTCTCTGGCCTCCCGGCAGCGGAGGTTTCCGGAGCCATTGAGCGTGAAACGGAATTCCGATCATTACTCGACGCGAAGATGGGAAACGGACCAATGCTGGTAG 438 0.5753 MTAILSLSTVPAVNFSFSSNNRASNERFHRRSPIRAVASPVPATSASLYEVLRIEQDASLTEIKSAFRSLAKLYHPDVASVRRLPDSDGDFIVIRNAYETLSDSSARAMYDLSLASRQRRFPEPLSVKRNSDHYSTRRWETDQCW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00456 145 PRINTS DnaJ domain signature 86 106 IPR001623 -
Arst1g00456 145 PRINTS DnaJ domain signature 49 67 IPR001623 -
Arst1g00456 145 PRINTS DnaJ domain signature 67 82 IPR001623 -
Arst1g00456 145 Pfam DnaJ domain 48 111 IPR001623 -
Arst1g00456 145 SUPERFAMILY Chaperone J-domain 40 114 IPR036869 -
Arst1g00456 145 ProSiteProfiles dnaJ domain profile. 47 114 IPR001623 -
Arst1g00456 145 SMART dnaj_3 46 106 IPR001623 -
Arst1g00456 145 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Arst1g00456 145 CDD DnaJ 49 103 IPR001623 -
Arst1g00456 145 Gene3D DnaJ domain 35 138 IPR036869 -
Arst1g00456 145 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 16 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00456 Arst-Chr1 4306932 4307675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00456 49 111 C2H2 Transcription Factor Family AT1G74250 40.909 8.49e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00456 - - gmx:100778445 141.354