Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00453 ATGAAGATCACTGTCATGACTGCTGATGAACAAATTCTCACTTTGGATGTCGATCCTCACGAATCTGTGGAAAACGTCAAGGCATTGCTGGAGGTTGAGACAAGTGTCCCTATTCAGCAACAGCAACTACTCTTCAATGGGAAGGAGATTAGGAATTCTGACAAGTTAAGTGCCATAGGCGTGAAGGATGATGATTTGCTTATGATGGTCTCCTCCGGTGGTGGCAGTGGCAGCAGCGGCGGTGCTGCTAGTGGAACTGCCAATGAATTGAGTTTAAATGCCGATGGATCCGCTGTAAACCCCAGTGCTTTCCAGCAGCACATAAGACGTGATTCTAATTTGATAGGTCAGCTCTTTCAGAGCGATCCGGAGTTGGCGCAAGCTATTCTTGGGAATGATCTTAACAGATTGCAGGAAGTTTTGCGAATGCGTCATCGCCAAAGGGAAGAACTACAGCGTCAGAAAGAAGAAGAGCTTGCTCTTCTCTATGCGGATCCTTTTGATGTTGAAGCCCAAAGAAAGATTGAAGCTGCCATTCGCCAAAAAGGAATTGATGAAAACTGGGCAGCTGCATTGGAACATAATCCTGAAGCTTTTGCTAGAGTGGTTATGCTCTATGTTGATATGGAAGTTAATGGTGTCCCACTGAAGGCATTTGTGGATAGTGGAGCCCAGTCTACCATTATATCAAAAAGTTGTGCTGAGCGCTGTGGATTGTTGAGACTCTTAGATCAGCGATACAAAGGTATTGCTCATGGAGTTGGTCAATCAGAAATATTAGGTCGAATACATGTAGCTCCAATCAAGATTGGGAGTATATTTTACCCTTGCTCATTCTTAGTTCTGGATTCTCCCAATATGGAGTTCCTTTTTGGGCTTGATATGCTCCGAAAGCACCAGAGAAAGACATACCGTCACGGTTTCTTGATGAGGAAAAGTTTAAGGAGGCTTCAAGCTCTGGCGCACAAGTTACATCAGGGGGCAATAATCCATCACCAAGGGGCCAGTCTTCTGGGGGAGCTTCTGGCGACAAGTCTAAGGACTCTGAATTTGAAGCCAAAGTTGCAAAGCTTGTTGAGTTAG 1083 0.4506 MKITVMTADEQILTLDVDPHESVENVKALLEVETSVPIQQQQLLFNGKEIRNSDKLSAIGVKDDDLLMMVSSGGGSGSSGGAASGTANELSLNADGSAVNPSAFQQHIRRDSNLIGQLFQSDPELAQAILGNDLNRLQEVLRMRHRQREELQRQKEEELALLYADPFDVEAQRKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYKGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQRKTYRHGFLMRKSLRRLQALAHKLHQGAIIHHQGASLLGELLATSLRTLNLKPKLQSLLS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00453 360 Pfam Ubiquitin family 3 70 IPR000626 GO:0005515
Arst1g00453 360 Coils Coil 134 157 - -
Arst1g00453 360 Gene3D - 1 80 - -
Arst1g00453 360 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Arst1g00453 360 SUPERFAMILY Acid proteases 190 300 IPR021109 -
Arst1g00453 360 SMART ubq_7 1 72 IPR000626 GO:0005515
Arst1g00453 360 Pfam Aspartyl protease 182 301 IPR019103 GO:0004190|GO:0006508
Arst1g00453 360 PRINTS Ubiquitin signature 11 31 IPR019956 -
Arst1g00453 360 PRINTS Ubiquitin signature 32 52 IPR019956 -
Arst1g00453 360 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 300 - -
Arst1g00453 360 Gene3D Acid Proteases 183 307 IPR021109 -
Arst1g00453 360 SUPERFAMILY Ubiquitin-like 1 83 IPR029071 -
Arst1g00453 360 CDD Ubl_Ddi1_like 1 70 IPR033882 -
Arst1g00453 360 CDD RP_DDI 189 300 IPR019103 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00453 Arst-Chr1 4287571 4293479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00453 1 70 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 30.000 1.26e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00453 K11885 - gmx:100779464 513.457