Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00444 ATGGATACTAAATCAGCTGTTGATTTGATGGAGTCTTCCTCCGAGGTTCACTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGTCAGGCATGGAACAACCGACAACATCGGCGACTGACATGTATAAACAACCATTTGTCATAGGTGTTGCTGGTGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAACTTCATGATCAACGAGTTGTATTAGTTAATCAGGATTCTTTTTACCATAACTTGACTGAAGAGGAACTTGCTCGTGTACAGGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCTATTGCTATGTGTTATGGACAAGTTGAAGCGTGGTGAGGCAGTAGATATTCCAAAGTACGACTTCAAGAGTTACAAGAGTGATGTGTATCCAAAAAGAAGGGTAAACCCCTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTCTGGCGAGAAGGATTAGACGAGATACTGGCGAGAAGGGTCGGGATATTGCAGTAGTTCTTGATCAGTATTCGAAATTTGTGAAACCAGCTTTTGATGATTTTATTCTCCCTACAAAGAAGTATGCTGATATCATTATACCGCGTGGGGGAGATAATCATGTAGCCATTGACCTGATTGTACAGCATATCCGCACGAAGCTTGGTCAACATGACCTGTGTAAAATATATTCCAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTGATACGTGATGCTCAGATAACAAAGCACGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGGCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGTTCTGTATACACTGGCGTGGACTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATTAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATCGGGAAAATTCTAATTCACAGAGAAGGTGACAACGGTCAGCAGCTAATATACGAAAAGCTTCCAAACGATATCTCGGATAGGCACGTTTTACTGTTGGATCCTATCCTTGGCACAGGTAATTCGGCTGTACAAGCGATCTCTTTACTTATAAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTGATATCTGCACCTCAAGGTGTTCATGTGGTCTGCAAAAAGTTTCCTAGAATAAAAATAGTGACATCTGAGATTGAGATTGGTTTGAATAAAGATTACCGCGTCATACCGGGCATGGGTGAGTTCGGCGACCGGTACTTCGGAACAGATGATGATGAGCAGTTGGTGGTTCCTTCACAGTAG 1434 0.417 MDTKSAVDLMESSSEVHFSGFHMDGFEQRKSGMEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPDAFDTELLLCVMDKLKRGEAVDIPKYDFKSYKSDVYPKRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKGRDIAVVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIEIGLNKDYRVIPGMGEFGDRYFGTDDDEQLVVPSQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00444 477 Pfam Uracil phosphoribosyltransferase 265 466 - -
Arst1g00444 477 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Arst1g00444 477 Gene3D - 251 466 IPR029057 -
Arst1g00444 477 CDD PRTases_typeI 324 439 IPR000836 -
Arst1g00444 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 240 IPR027417 -
Arst1g00444 477 CDD UMPK 49 247 IPR000764 -
Arst1g00444 477 FunFam Uridine kinase 44 250 - -
Arst1g00444 477 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Arst1g00444 477 PANTHER URIDINE KINASE 42 376 - -
Arst1g00444 477 FunFam Uridine kinase 251 466 - -
Arst1g00444 477 PRINTS Uridine kinase signature 77 88 - -
Arst1g00444 477 PRINTS Uridine kinase signature 193 204 - -
Arst1g00444 477 PRINTS Uridine kinase signature 47 64 - -
Arst1g00444 477 PRINTS Uridine kinase signature 179 189 - -
Arst1g00444 477 PRINTS Uridine kinase signature 122 137 - -
Arst1g00444 477 PRINTS Uridine kinase signature 215 228 - -
Arst1g00444 477 NCBIfam uridine kinase 46 247 IPR000764 -
Arst1g00444 477 Gene3D - 43 250 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00444 Arst-Chr1 4133421 4139477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00444 1 469 PRT Gene Family AT4G26510 83.864 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00444 K00876 - gmx:100527893 880.937