Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00443 ATGGATACTAAATCAGCTGTTGATTTGATGGAGTCTTCCTCCGAGGTTCACTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGTCAGGCATGGAACAACCGACAACATCGGCGACTGACATGTATAAACAACCATTTGTCATAGGTGTTGCTGGTGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAACTTCATGATCAACGAGTTGTATTAGTTAATCAGGATTCTTTTTACCATAACTTGACTGAAGAGGAACTTGCTCGTGTACAGGATTACAACTTTGACCATCCTGCAGATGCTTTTGATACTGAGCTATTGCTATGTGTTATGGACAAGTTGAAGCGTGGTGAGGCAGTAGATATTCCAAAGTACGACTTCAAGAGTTACAAGAGTGATGTGTATCCAAAAAGAAGGGTAAACCCCTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTCTGGCGAGAAGGATTAGACGAGATACTGGCGAGAAGGGTCGGGATATTGCAGTAGTTCTTGATCAGTATTCGAAATTTGTGAAACCAGCTTTTGATGATTTTATTCTCCCTACAAAGAAGTATGCTGATATCATTATACCGCGTGGGGGAGATAATCATGTAGCCATTGACCTGATTGTACAGCATATCCGCACGAAGCTTGGTCAACATGACCTGTGTAAAATATATTCCAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTGATACGTGATGCTCAGATAACAAAGCACGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGGCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGTTCTGTATACACTGGCGTGGACTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATTAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATCGGGAAAATTCTAATTCACAGAGAAGGTGACAACGGTCAGCAGCTAATATACGAAAAGCTTCCAAACGATATCTCGGATAGGCACGTTTTACTGTTGGATCCTATCCTTGGCACAGGTAATTCGGCTGTACAAGCGATCTCTTTACTTATAAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTGATATCTGCACCTCAAGGTGTTCATGTGGTCTGCAAAAAGTTTCCTAGAATAAAAATAGTGACATCTGAGATTGAGATTGGTTTGAATAAAGATTACCGCGTCATACCGGGCATGGGTGAGTTCGGCGACCGGTACTTCGGAACAGATGATGATGAGCAGTTGGTGGTTCCTTCACAGTAG 1437 0.4175 MDTKSAVDLMESSSEVHFSGFHMDGFEQRKSGMEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPADAFDTELLLCVMDKLKRGEAVDIPKYDFKSYKSDVYPKRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKGRDIAVVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIEIGLNKDYRVIPGMGEFGDRYFGTDDDEQLVVPSQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00443 478 PANTHER URIDINE KINASE 42 377 - -
Arst1g00443 478 CDD UMPK 49 248 IPR000764 -
Arst1g00443 478 Pfam Uracil phosphoribosyltransferase 266 467 - -
Arst1g00443 478 FunFam Uridine kinase 252 467 - -
Arst1g00443 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 241 IPR027417 -
Arst1g00443 478 SUPERFAMILY PRTase-like 251 468 IPR029057 -
Arst1g00443 478 PRINTS Uridine kinase signature 47 64 - -
Arst1g00443 478 PRINTS Uridine kinase signature 77 88 - -
Arst1g00443 478 PRINTS Uridine kinase signature 180 190 - -
Arst1g00443 478 PRINTS Uridine kinase signature 194 205 - -
Arst1g00443 478 PRINTS Uridine kinase signature 123 138 - -
Arst1g00443 478 PRINTS Uridine kinase signature 216 229 - -
Arst1g00443 478 Gene3D - 43 251 IPR027417 -
Arst1g00443 478 NCBIfam uridine kinase 46 248 IPR000764 -
Arst1g00443 478 Gene3D - 252 467 IPR029057 -
Arst1g00443 478 FunFam Uridine kinase 44 251 - -
Arst1g00443 478 Pfam Phosphoribulokinase / Uridine kinase family 49 236 IPR006083 GO:0005524|GO:0016301
Arst1g00443 478 CDD PRTases_typeI 325 440 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00443 Arst-Chr1 4133420 4139477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00443 1 470 PRT Gene Family AT4G26510 83.686 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00443 K00876 - gmx:100527893 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00443 1 4133420 4139477 Arst7g00217 7 1309434 1315195 PCT