Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00442 ATGGATGGTTTTGAGCAAAGAAAGTCAGGCATGGAACAACCGACAACATCGGCGACTGACATGTATAAACAACCATTTGTCATAGGTGTTGCTGGTGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAACTTCATGATCAACGAGTTGTATTAGTTAATCAGGATTCTTTTTACCATAACTTGACTGAAGAGGAACTTGCTCGTGTACAGGATTACAACTTTGACCATCCTGCAGATGCTTTTGATACTGAGCTATTGCTATGTGTTATGGACAAGTTGAAGCGTGGTGAGGCAGTAGATATTCCAAAGTACGACTTCAAGAGTTACAAGAGTGATGTGTATCCAAAAAGAAGGGTAAACCCCTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTCTGGCGAGAAGGATTAGACGAGATACTGGCGAGAAGGGTCGGGATATTGCAGTAGTTCTTGATCAGTATTCGAAATTTGTGAAACCAGCTTTTGATGATTTTATTCTCCCTACAAAGAAGTATGCTGATATCATTATACCGCGTGGGGGAGATAATCATGTAGCCATTGACCTGATTGTACAGCATATCCGCACGAAGCTTGGTCAACATGACCTGTGTAAAATATATTCCAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTGATACGTGATGCTCAGATAACAAAGCACGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGGCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGTTCTGTATACACTGGCGTGGACTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATTAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATCGGGAAAATTCTAATTCACAGAGAAGGTGACAACGGTCAGCAGCTAATATACGAAAAGCTTCCAAACGATATCTCGGATAGGCACGTTTTACTGTTGGATCCTATCCTTGGCACAGGTAATTCGGCTGTACAAGCGATCTCTTTACTTATAAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTGATATCTGCACCTCAAGGTGTTCATGTGGTCTGCAAAAAGTTTCCTAGAATAAAAATAGTGACATCTGAGATTGAGATTGGTTTGAATAAAGATTACCGCGTCATACCGGGCATGGGTGAGTTCGGCGACCGGTACTTCGGAACAGATGATGATGAGCAGTTGGTGGTTCCTTCACAGTAG 1371 0.4179 MDGFEQRKSGMEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPADAFDTELLLCVMDKLKRGEAVDIPKYDFKSYKSDVYPKRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKGRDIAVVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIEIGLNKDYRVIPGMGEFGDRYFGTDDDEQLVVPSQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00442 456 FunFam Uridine kinase 22 229 - -
Arst1g00442 456 Pfam Phosphoribulokinase / Uridine kinase family 27 214 IPR006083 GO:0005524|GO:0016301
Arst1g00442 456 Gene3D - 21 229 IPR027417 -
Arst1g00442 456 Pfam Uracil phosphoribosyltransferase 244 445 - -
Arst1g00442 456 Gene3D - 230 445 IPR029057 -
Arst1g00442 456 CDD PRTases_typeI 303 418 IPR000836 -
Arst1g00442 456 PANTHER URIDINE KINASE 24 355 - -
Arst1g00442 456 PRINTS Uridine kinase signature 194 207 - -
Arst1g00442 456 PRINTS Uridine kinase signature 25 42 - -
Arst1g00442 456 PRINTS Uridine kinase signature 172 183 - -
Arst1g00442 456 PRINTS Uridine kinase signature 55 66 - -
Arst1g00442 456 PRINTS Uridine kinase signature 158 168 - -
Arst1g00442 456 PRINTS Uridine kinase signature 101 116 - -
Arst1g00442 456 NCBIfam uridine kinase 24 226 IPR000764 -
Arst1g00442 456 CDD UMPK 27 226 IPR000764 -
Arst1g00442 456 SUPERFAMILY PRTase-like 229 446 IPR029057 -
Arst1g00442 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 219 IPR027417 -
Arst1g00442 456 FunFam Uridine kinase 230 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00442 Arst-Chr1 4133407 4139477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00442 1 448 PRT Gene Family AT4G26510 85.938 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00442 K00876 - gmx:100527893 835.869