Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00440 ATGCCTGAAAGCTTAAGGAATCTTTCACTTTCTCCCAAAATCTTCTTCTTCACCTTGCTTCTTTCATTAAACATCATTCTCCTCTTTCCATGTTGTTGTTTCTCACTTAATGAACAAGGCCAAGCTCTTTTATCATGGAAGAACAGTTTAAACAGCACTTCAGATTCATTAGCATCATGGAACAATTCTACTTCAACACCATGCAACTTTTTTGGTGTTCGTTGCAACTCACAAGGGGATGTTGTCCAAATAAATTTGAAATCAGTGAACTTGGAAGGTTCATTGGTACCTTCAAATTTTCAACCATTAAGGTCATTGAAGATTCTTATCCTCTCATCAACAAACATCACAGGAAGGATCCCAAAGGAGATTGGAGACTACCAAGAACTCATGTTTCTTGATCTTAGTGGCAATTCTCTATTTGGCGAAATCCCAGAAGAGATTTGTAGGCTAAGAAAACTAGTTAGTTTGTCCCTTCACAGAAACTCACTTGAAGGAAACATTCCATTCAGCATTGGGAATCTATCAAGCCTTGTGAACTTGACACTCTATGATAATCATCTCAGTGGTGTGATTCCAAAGAGCATTGGATCCTTAAACAAGCTTCAAGTGTTTAGAGCTGGTGGCAACAAGAATCTTAAGGGTGAGCTTCCATGGGAGATTGGAAACTGCACCAACTTGGTCATGTTAGGTCTTGCAGAAACCAGCATTTCTGGGAGAATCCCTTCATCAATTGGAATGCTGAAAAGGATTCAAACCATGGCAATTTACACAACACTATTGTCAGGTCCTATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACATTTACTTGTACCAGAACTCTCTCTCAGATTCAATCCCAAACCAAATTGGAGAACTCAGCAAGCTTCAGAATCTTCTTTTATGGCAGAACAACATAGTTGGTAGAATCCCAGAAGACCTTGGAAGATGCAGAGAGATCAAGGTCATAGATTTCTCCGAAAACCTTCTGACAGGTAACATTCCAAGGAGTTTTGGTCAGCTTTCTAATCTTGAAGAGCTTCAGCTTAGTGTCAACCAGGTCTCAGGCTCCATACCTCCTGAAATCTCAAACTGCACCTCTCTGGTTCAGCTGCAGCTCGACAACAACGCTCTCTCCGGCGAGATTCCGGCACGCATCGGCGACTTGAGAAGCCTAACTCTGTTCTATGCTTGGCAGAACAATCTAACAGGAAAACTCCCAGATAGTCTTTCTGAGTGCCAAGAACTTGAGGCACTTGATCTTTCATACAACAATTTGATAGGTCCAATTCCAAACCAACTATTCGAATTGAAAAATCTCACCAAACTCTTGCTTCTTGCCAATGATTTATCCGGCGTTATTCCGCCGGATATAGGTAACTGCACTAGCCTATACCGGCTCCGGTTGAATCACAATAGACTAGCAGGTAACATTCCACAAAAGATTGGAAACTTAAAAAATCTGAATTTCTTGGATTTGAGCAACAACCATCTCAGTGGGGACTTTCCTCAAACACTTGGTGGGTGCCAGAACCTTGAGTTCTTGGATCTTCATTCAAACAGCATCACAGGTTCTGTTCCTGATTCTCTTCCCAAAAGCCTTCAATTAATTGACATATCAGATAACATGCTTTCAGGATCATTGACTCATTCCATTGGTTCACTGAATGAATTAACAAAACTCTACCTTGGAAAGAACCAAATCAATGGAAGAATACCTTCAGAGATTCTCTCTTGTTCCAAGCTACAACTTCTTGATCTAGGAAGCAACAGTTTCTCAGGGGAAATCCCAAAAGAACTTGGCCTACTTTCTTCGCTCGAAATCTCGCTGAATCTCAGCCATAACCGACTCTCCGGCGAGATTCCGACCGAGTTTTCGAGCCTGGGAAAGCTAGGAGTACTTGATCTCTCACACAACAATCTCACAGGGAACTTAGATGCTCTTTCTAGCCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATGGCTTCTCTGGTGAATTACCAAACACACCATTCTTCCATAAGCTCCCTCTCAGTGATCTCGCCGAAAATCAAGGTCTCTATATTTCTGGAACTGCTATAAACTCTTCTTTGAAAACAGAGTCAAAGAGTCACAAAAAATCAGTTATGAAGTTTGTTATGTCAATTCTCCTTAGCATCAGTGCTGCACTGGTGCTGCTAACGGTCTGCGTCCTGATTCGTTCACGATTGAACGAATCATGGACGCAGGCCGATAGCTGGGAATTGACATTATATCAAAAATTTGAACTATCCATTGATGAAATTGTCTTGAATTTGACCTCATCGAATGTGATTGGAACCGGAAGCTCTGGAGTGGTGTACAAGGTATTGATTCCCAACGGCGAAATACTAGCCGTTAAGAAGATGTGGTTGTCCACGTCATCGGAAGAATCTAGAGCATTTGATAACGAGATTCGAACACTTGGATCAATTAGGCACAAGAATATCATAAGGCTCCTTGGTTGGGGATCCAACAGGAACTTGAAACTCCTTTTCTATGATTATCTCCCTAATGGAAGTTTGAGTTCTTTGCTTCATGGTTCAGGGAAGGGGAAAGCTGAATGGGAAACAAGATATGATGTTGTGTTGGGTGTAGCTCATGCACTTTCATATTTGCACCATGATTGTGTTCCTTCTATAATCCATGGAGATGTTAAGGCCATGAATGTCTTGTTAGGACCTGGATTTCAACCTTACCTTGCTGATTTTGGTCTTGCAAGAATTGCTACTGATACTGAAAATTCTATGCAAGTACAAAGACACTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAACCAATAACTGAAAAGAGTGATGTATACAGTTTCGGAATGGTTCTACTTGAGGTTCTAACAGGAAGGCACCCATTAGACCCAACCCTACCAATGGGTGCACCCTTGGTTCAATGGGTTAGGAACCACTTAGCCAACAAAGGTGACCCATCAGACATCCTTGACTCAAAGCTCAAAGGGAGATCTGACCCTACCATGCATGAGATGCTACAAACTTTGGCAGTGTCATTTCTATGTGTTAGCACAAGAGCAAATGATAGGCCAACAATGAAGGATGTTGTTGCAATGTTAAAGGAAATTAGGCCTATTGAAACATCAAGGCCTGATTATGATGTGCTGAAGAATAAAAAAGGAGGTTTGAGCTTAGCATCACATAGTTCTTCACCAATTAGACCACCATCACCATCACCATCACCATCACTACCTCCTAGGAATGCTGTTGTTTCTCATGGATCTTCTAATTGTTCCTATAATTTCTCTGATGAGTCAAACAGTTAA 3342 0.4138 MPESLRNLSLSPKIFFFTLLLSLNIILLFPCCCFSLNEQGQALLSWKNSLNSTSDSLASWNNSTSTPCNFFGVRCNSQGDVVQINLKSVNLEGSLVPSNFQPLRSLKILILSSTNITGRIPKEIGDYQELMFLDLSGNSLFGEIPEEICRLRKLVSLSLHRNSLEGNIPFSIGNLSSLVNLTLYDNHLSGVIPKSIGSLNKLQVFRAGGNKNLKGELPWEIGNCTNLVMLGLAETSISGRIPSSIGMLKRIQTMAIYTTLLSGPIPEEIGNCSELQNIYLYQNSLSDSIPNQIGELSKLQNLLLWQNNIVGRIPEDLGRCREIKVIDFSENLLTGNIPRSFGQLSNLEELQLSVNQVSGSIPPEISNCTSLVQLQLDNNALSGEIPARIGDLRSLTLFYAWQNNLTGKLPDSLSECQELEALDLSYNNLIGPIPNQLFELKNLTKLLLLANDLSGVIPPDIGNCTSLYRLRLNHNRLAGNIPQKIGNLKNLNFLDLSNNHLSGDFPQTLGGCQNLEFLDLHSNSITGSVPDSLPKSLQLIDISDNMLSGSLTHSIGSLNELTKLYLGKNQINGRIPSEILSCSKLQLLDLGSNSFSGEIPKELGLLSSLEISLNLSHNRLSGEIPTEFSSLGKLGVLDLSHNNLTGNLDALSSLQNLVSLNVSFNGFSGELPNTPFFHKLPLSDLAENQGLYISGTAINSSLKTESKSHKKSVMKFVMSILLSISAALVLLTVCVLIRSRLNESWTQADSWELTLYQKFELSIDEIVLNLTSSNVIGTGSSGVVYKVLIPNGEILAVKKMWLSTSSEESRAFDNEIRTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVVLGVAHALSYLHHDCVPSIIHGDVKAMNVLLGPGFQPYLADFGLARIATDTENSMQVQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPMGAPLVQWVRNHLANKGDPSDILDSKLKGRSDPTMHEMLQTLAVSFLCVSTRANDRPTMKDVVAMLKEIRPIETSRPDYDVLKNKKGGLSLASHSSSPIRPPSPSPSPSLPPRNAVVSHGSSNCSYNFSDESNS 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00440 1113 SUPERFAMILY RNI-like 84 406 - -
Arst1g00440 1113 ProSiteProfiles Protein kinase domain profile. 770 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00440 1113 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 196 287 - -
Arst1g00440 1113 FunFam Putative LRR receptor-like serine/threonine-protein kinase 612 697 - -
Arst1g00440 1113 Gene3D Ribonuclease Inhibitor 38 147 IPR032675 -
Arst1g00440 1113 SUPERFAMILY RNI-like 326 673 - -
Arst1g00440 1113 Pfam Leucine rich repeat 466 525 IPR001611 GO:0005515
Arst1g00440 1113 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Arst1g00440 1113 Pfam Protein kinase domain 773 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00440 1113 PRINTS Leucine-rich repeat signature 491 504 - -
Arst1g00440 1113 PRINTS Leucine-rich repeat signature 631 644 - -
Arst1g00440 1113 Gene3D Ribonuclease Inhibitor 148 245 IPR032675 -
Arst1g00440 1113 Gene3D Ribonuclease Inhibitor 248 416 IPR032675 -
Arst1g00440 1113 Gene3D Ribonuclease Inhibitor 417 701 IPR032675 -
Arst1g00440 1113 FunFam Leucine-rich receptor-like protein kinase family protein 339 611 - -
Arst1g00440 1113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 307 1045 - -
Arst1g00440 1113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 307 1045 - -
Arst1g00440 1113 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 847 1063 - -
Arst1g00440 1113 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Arst1g00440 1113 FunFam Leucine-rich receptor-like protein kinase family protein 36 195 - -
Arst1g00440 1113 MobiDBLite consensus disorder prediction 1091 1113 - -
Arst1g00440 1113 SMART serkin_6 770 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g00440 1113 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Arst1g00440 1113 SMART LRR_typ_2 440 464 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 103 127 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 344 368 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 488 512 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 151 175 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 606 630 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 558 582 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 296 320 IPR003591 -
Arst1g00440 1113 SMART LRR_typ_2 631 654 IPR003591 -
Arst1g00440 1113 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Arst1g00440 1113 Gene3D Phosphorylase Kinase; domain 1 737 846 - -
Arst1g00440 1113 Gene3D Transferase(Phosphotransferase) domain 1 847 1064 - -
Arst1g00440 1113 MobiDBLite consensus disorder prediction 1057 1113 - -
Arst1g00440 1113 FunFam Putative LRR receptor-like serine/threonine-protein kinase 755 846 - -
Arst1g00440 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Arst1g00440 1113 SUPERFAMILY Protein kinase-like (PK-like) 767 1045 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00440 Arst-Chr1 4085208 4089482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00440 33 1111 Receptor kinase-like Gene Family AT5G56040 64.246 0.0 1370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst1g00440 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00440 - - gmx:100802880 1672.52