Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00431 ATGGGTTCGCCGCCGAAGAAGATCATGCTATGCAGTTCGGAAAAGGAGATTTTCAATGTGGAAGAACAAGTGATGGTGCAACATTCGGTGATCATAAACAACATGATCAAAGATGGGTCGTTTAACCATGAAGAGAGCAAGATTCCACTGGATTGCGTTGACTCCAAGACCCTCAAGAAGATCATCGAGTATTGTACGCACCACACTCACCACCACAACGACAACCAAAAAGATCTTGAGGCTTGGGATGCTCAATTTCTCAATGTTGATCCTAACACCCTTTATGATTTGTTGATGGCAGCAAATTATCTTGAGATTAGAAATCTCTTGGATCTGATATACGGAACTATAAAAAATATGATAAAGGGAAAGAAAATAGATGAGATACGCAGAATCTTCAACATCAAAGACCATGGCTTCACTCCTGAAGAGGAAGAACAAAATCGCAAGGAGTACCCACATCTTTATTAG 471 0.4055 MGSPPKKIMLCSSEKEIFNVEEQVMVQHSVIINNMIKDGSFNHEESKIPLDCVDSKTLKKIIEYCTHHTHHHNDNQKDLEAWDAQFLNVDPNTLYDLLMAANYLEIRNLLDLIYGTIKNMIKGKKIDEIRRIFNIKDHGFTPEEEEQNRKEYPHLY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00431 156 SUPERFAMILY Skp1 dimerisation domain-like 79 154 IPR036296 GO:0006511
Arst1g00431 156 PANTHER SKP1 6 151 IPR016897 GO:0006511
Arst1g00431 156 Pfam Skp1 family, tetramerisation domain 6 69 IPR016073 GO:0006511
Arst1g00431 156 PIRSF SCF_Skp 1 155 IPR016897 GO:0006511
Arst1g00431 156 SMART skp1_3 5 106 IPR001232 GO:0006511
Arst1g00431 156 SUPERFAMILY POZ domain 7 71 IPR011333 -
Arst1g00431 156 Pfam Skp1 family, dimerisation domain 108 153 IPR016072 GO:0006511
Arst1g00431 156 Gene3D Potassium Channel Kv1.1; Chain A 3 156 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00431 Arst-Chr1 3979731 3982493 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst1g00431 Skp1_POZ 3.7e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00431 K03094 - tcc:18607537 137.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00500 5 4183253 4184902 Arst1g00431 1 3979731 3982493 PCT