Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00405 ATGCAAGGTTACTATAAACAGGTTGATGAAACTGCTCATACAATTGACAAGGATGGATGGCTTCACACTGGGGATGTAGGATACATAGATGATGAAGAGAATATATTTATTGTTGATCGCATCAAGGAGTTAATTAAATACAAAGGATTCCAAGTAGCTCCTGCTGAGTTAGAGGCCATTTTGTTATCTCATCCGTCGGTAGAAGATGCTGCAGTTGTGCCGTTGCCAGATGAAGAAGCAGGGGAAATCCCAGCGGCGAGTGTTGTCGTGAGCCGCGGCGCAAGAGTGACCGAAAAGGAAATCATGGACTATGTTGCTTCAAATGCTGCACATTACAAGAAAGTGAGGGTGGTGCACTTTGTAGAAACCATACCAAAATCACCTTCTGGCAAGATAATGAGAAGGCTTATTAAAGAGAGGATGGTGAAAAAAATGAAGACAAACTCCACACCAAAATCCAACATTTCTTAA 471 0.4204 MQGYYKQVDETAHTIDKDGWLHTGDVGYIDDEENIFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAVVPLPDEEAGEIPAASVVVSRGARVTEKEIMDYVASNAAHYKKVRVVHFVETIPKSPSGKIMRRLIKERMVKKMKTNSTPKSNIS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00405 156 FunFam 4-coumarate--CoA ligase 2 43 144 - -
Arst1g00405 156 Pfam AMP-binding enzyme C-terminal domain 56 131 IPR025110 -
Arst1g00405 156 SUPERFAMILY Acetyl-CoA synthetase-like 1 143 - -
Arst1g00405 156 Gene3D - 43 147 IPR045851 -
Arst1g00405 156 Pfam AMP-binding enzyme 1 47 IPR000873 -
Arst1g00405 156 Gene3D - 1 42 IPR042099 -
Arst1g00405 156 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00405 Arst-Chr1 3659268 3660564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00405 1 142 Monolignol Biosynthesis Gene Families AT1G62940 71.831 1.38e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00405 K01904 - adu:107472893 307.375