Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00393 ATGGCTGTAACCGACCGGTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCCCAAGAGCGTGGCAACCGTGTGGTCCACTATTACCTGAAGGATTCTGACGGGGAATCCATACTCGCTGTTGTGGGCACTGAGAGGAGTGTTAGGCACATGTTCTATGTTGTGGCCGATGAGTTTTTGGAAATTTGTGGGAAGGAAGGTTCTGTTCCTGCCGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTTGATTGGCTGACGTCAACGCTTTCGAAGCAGCATCTTCAGGGAGATAGAACTGGATCACCTAGTCATTCTTCAGGACAAGCTTATGATACCACAAATGGTAGTGTCAATGAAATTACTGGTCTTCCTGCACCGATAGCGAATAGCAAGGGATTTCTAACCCGAAACTCTAAAATATCCAAGTCTGACATTGTTTGGTCTGGAGTGGCGTGGACATGTGGCAAGCAGCTTAAACATTATCATGCTTTTTGCAGGAATGGCATCAAAATAATTGTTCAATCATTTGTTTTTGTCATGGGCAAGGGAGAGAATCATTATGTTGCTTATTTAGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTGATTCCTGTTCGAAATCCACATCCCCGGGAAGTTTTCATCACACCTTATTCTCAAGTTATTAGTGCAGAGTGTGTTGATGGTCCCACCACGGTCTTAAGTCGTGAACATTATGAAAAATGCATGCCTTGCTTTTCCCCAACTTCATCAGATAGAATACATATGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTGCGGGGATACTATGATCAACCAATTCTTTCTTGCTTGCAATTTGATTCTATGCTGAATCCTAAGGGAAATGGCCTAGCAGGAGGAGATGAAGAGTTGAGTGCAGGTGAAACTGTAAAGCTCAGAGCCAAGAGAAGGGATAGGGGAACCCCTCAGTCTTTGATTGGTCGGCGGGGAGTTAGGAAGTTAGTTAGGAGTCAGCAAATGATGGTATACAAAAACTCACAGGGTGTAAATAATTCTAGGGCAGATAGGAGATTGTTTTCTCTGAAGGAAGTTGAGTCTCAACCTTGGTATAATGTCACATACAGGATTGATGACAAGATAGAGGTCCTCTGTCAGGATAGCGGTATCAGAGGCTGCTGGTTCAGGTGTACGGTTGTGCAGGTATCTCGGAAGCAGATGAAAGTCCAATATGATGATATTCAGGATGAAGATGGAAGTGGGAATCTTAAGGAATGGATCCCTGCTTTCAAGTTGGCCATGCCTGATAAACTTGGGATGAGACATCCTGGCCGATCGACAATCAGACCAGCTCCTCCAACTTCCAAAGATCAAGAATTGGTTATTGGAGTTGGAACTGCAATTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTGGAACTGATAACTATGTTGATGATAATGTGCAAGCATACTTTCCTGGTGAAGGCTTGCTAATGAAAGTACGCAAGAAAGATCTAAGAATATCTAGAGATTGGTCCGGGGACAGGTGGATTGGTATTAAGCCGAAGCTTGATATAACCTCAACTATATTCGCCATTAACGGCCTTAACACGAAGCACTCCACGTCCCCAGCTAAAGATGGGGACTCTATTGGTGTTGCAAATTCATGTGATGAAGTTCCAGCGAGTGACGAGCCTATTAATGAACCAGATTTTGCTGAAAAGATGGTTGAGGGTGTTGCTGAAGATGGGGATAACAATGATGATGGTTATAATGATAATAATGATAGTAAAAATAGTAATCTTGTGTCAGAAAAAGATACTCGAGCTGATAACAATGAGATTGAGATGAATAGCATTGGTAATGAAGATAATGGTGATGATTCTAATAAGGACAGTAATGACAATGTTGATAACAAAGACGGCGAAAACGATAATAAGGACAGGGAGGCGTTTGGGACTTCCATGGAGGACTGTAAAGCTGACGAACCCGCCGAAATGGCTGTATAA 2070 0.4324 MAVTDRCFVEWKEQFVSQERGNRVVHYYLKDSDGESILAVVGTERSVRHMFYVVADEFLEICGKEGSVPAGFKWRSRREVVDWLTSTLSKQHLQGDRTGSPSHSSGQAYDTTNGSVNEITGLPAPIANSKGFLTRNSKISKSDIVWSGVAWTCGKQLKHYHAFCRNGIKIIVQSFVFVMGKGENHYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISAECVDGPTTVLSREHYEKCMPCFSPTSSDRIHMCFRQFRSNKVKPFDLSKLRGYYDQPILSCLQFDSMLNPKGNGLAGGDEELSAGETVKLRAKRRDRGTPQSLIGRRGVRKLVRSQQMMVYKNSQGVNNSRADRRLFSLKEVESQPWYNVTYRIDDKIEVLCQDSGIRGCWFRCTVVQVSRKQMKVQYDDIQDEDGSGNLKEWIPAFKLAMPDKLGMRHPGRSTIRPAPPTSKDQELVIGVGTAIDAWWSDGWWEGVVTGTDNYVDDNVQAYFPGEGLLMKVRKKDLRISRDWSGDRWIGIKPKLDITSTIFAINGLNTKHSTSPAKDGDSIGVANSCDEVPASDEPINEPDFAEKMVEGVAEDGDNNDDGYNDNNDSKNSNLVSEKDTRADNNEIEMNSIGNEDNGDDSNKDSNDNVDNKDGENDNKDREAFGTSMEDCKADEPAEMAV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00393 689 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 380 659 - -
Arst1g00393 689 MobiDBLite consensus disorder prediction 601 689 - -
Arst1g00393 689 CDD Tudor_Agenet_AtDUF_rpt1_3 391 469 - -
Arst1g00393 689 MobiDBLite consensus disorder prediction 645 689 - -
Arst1g00393 689 SMART BAH_4 168 287 IPR001025 GO:0003682
Arst1g00393 689 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Arst1g00393 689 MobiDBLite consensus disorder prediction 560 589 - -
Arst1g00393 689 Pfam BAH domain 172 272 IPR001025 GO:0003682
Arst1g00393 689 SMART agenet_At_2 389 454 IPR014002 -
Arst1g00393 689 SMART agenet_At_2 476 534 IPR014002 -
Arst1g00393 689 Pfam Agenet domain 394 469 IPR008395 -
Arst1g00393 689 Gene3D - 135 292 IPR043151 -
Arst1g00393 689 CDD BAH_plant_1 163 292 - -
Arst1g00393 689 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00393 Arst-Chr1 3571692 3577159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00393 403 533 PHD Transcription Factor Family AT5G58610 29.851 3.03e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00393 - - gmx:100306240 927.546