Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00389 ATGAAAGTTCTGGTCGTGGGGCGCTCCATCACTTGCCCCTTATATAAGACTTGGAATTTCACTCCAACACCAATTCAATCCACACCCAAAATCTCTCTGCAAGCAATTCACACCCATCTTCTTTCATTTTCATCTTCTTCTTCATCATCATCATCTTCTTCCTCTTCTAATTCTTCTTCTTCCATGGCTACTTGCGTAGATTCCTCAACCTCCTCCCCTTTTTCTCGGAAGCCAAACGGGTCCCAAACTGATGATTGTTCCTATAACTACCTCAAATTCTGCCGACCCACTTTCTCCGATCGTGTTTCCATTCCCAAGAACAAACCCCTGCATACACGCACGGTTATTGAAGAGTCTGAGGCTAAGGTTGATGTTGACGATCGTGTTCATGATGAAGATGATGATGATGATGATGATCTATGGCGGAAGATGAAGGAAGAAGCGAAATCCGATGTGGAACAAGAACCTATTTTATCCAACTACTATTTCAGTTCAATCTTGTGCCACAAGTCTTTAGAAAGCGCGTTATCCAATCATCTTTCCAACAAATTATCCAGCTTGAATCTCAACAGCACCACTCTCGTTGATCTCTTCATGGGGATCTTGGAATCCGACGAAGAAATCATNNNNNNNNNNNNNNNNNCTGCTTGCATAAGCTACGTGCATTGCTTATTGAATTTCAAAGGCTTCTTGGCTTGCCAGGCTCATAGGATCGCTCACAAGCTATGGCTCCAAGGAAGAAAAATTCTAGCCCTCTTGATTCAGAACCGTGTATCCGAGGTTTTCGCGGTCGATATTCACCCTGGGGCGAACATCGGCCGCGGAATCCTTCTGGATCACGCGACTGGCCTCGTCCTAGGCGAGACCGCCGTTATTGGGAACAATGTGTCCATTTTGCACAACGTCACGTTGGGTGGGACCGGAAAAGCCTCCGGCGACCGGCATCCGAAGATCGGTGACGGGGTTTTGATAGGTGCAGGGACTTGTATCTTAGGGAATATTAAGATTGGTGATGGTGCTAAGATTGGTGCTGGTTCTGTAGTGTTGAAGGATGTTCCTCCAAGAACAACTGCAGTTGGGAATCCTGCTAAATTGATTGGAGGAAAAGATAATCCCATTAGGCTTGATAAGATTCCTAGCTTCACTATGGACCATACTTCATATATTTCTGAGTGGTCTGATTATGTTATTTAG 1194 0.4447 MKVLVVGRSITCPLYKTWNFTPTPIQSTPKISLQAIHTHLLSFSSSSSSSSSSSSSNSSSSMATCVDSSTSSPFSRKPNGSQTDDCSYNYLKFCRPTFSDRVSIPKNKPLHTRTVIEESEAKVDVDDRVHDEDDDDDDDLWRKMKEEAKSDVEQEPILSNYYFSSILCHKSLESALSNHLSNKLSSLNLNSTTLVDLFMGILESDEEIXXXXXXXACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKILALLIQNRVSEVFAVDIHPGANIGRGILLDHATGLVLGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAKLIGGKDNPIRLDKIPSFTMDHTSYISEWSDYVI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00389 397 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 324 352 IPR018357 GO:0016740
Arst1g00389 397 FunFam Serine acetyltransferase 265 390 - -
Arst1g00389 397 Pfam Serine acetyltransferase, N-terminal 140 235 IPR010493 GO:0005737|GO:0006535|GO:0009001
Arst1g00389 397 PANTHER SERINE ACETYLTRANSFERASE 89 397 - -
Arst1g00389 397 Gene3D serine acetyltransferase, domain 1 123 264 IPR042122 -
Arst1g00389 397 Pfam Bacterial transferase hexapeptide (six repeats) 315 349 IPR001451 -
Arst1g00389 397 CDD LbH_SAT 262 362 IPR045304 -
Arst1g00389 397 Gene3D Hexapeptide repeat proteins 265 379 - -
Arst1g00389 397 SUPERFAMILY Trimeric LpxA-like enzymes 138 366 IPR011004 -
Arst1g00389 397 SMART SATase_N_2_a 140 235 IPR010493 GO:0005737|GO:0006535|GO:0009001
Arst1g00389 397 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00389 Arst-Chr1 3541019 3542600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00389 134 385 Miscellaneous Gene Families AT2G17640 52.490 1.15e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00389 K00640 - gmx:606507 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00389 1 3541019 3542600 Arst1g00389 1 3541019 3542600 ECH
Arst5g00443 5 3741538 3745641 Arst1g00389 1 3541019 3542600 PCT
Arst1g00389 1 3541019 3542600 Arst5g00180 5 1666386 1669300 PCT
Arst1g00389 1 3541019 3542600 Arst7g00281 7 1750796 1752588 PCT