Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00361 ATGGACTCCGCCCAAGAAAACTCACTCACGGAGCTCCGGCAAAGCAGTTCCGGCAACGCCGCGGAATTGCAATCGGAGGATCCGAATCGATATTTTCCACAGCCTGATGCCGGAGCCACATCGTCCGCCAACGCCGGCGGTGCAAGGTACAAGCTGATGTCTCCGGCAAAGCTCCCGATCTCGAGGTCCCCGTGCGTCACGATTCCTCCGGGACTCAGTCCGACGTCATTTCTCGAATCTCCGGTGCTGCTTTCCAACATGAAGGTTGAACCTTCACCAACTACAGGTTCCCTTTCTAAGCTTCATCAAACAGGGCATGGTTCTGTGACTTCTGCTGCTGTATCTACTACATTTCCTGTAACCACTGTATGCTTCAATACCAGTACTGTTGATGACAGAACATCGAGCTTCTTTGAGTTCAAAGCACACAATAGATCAAATATGGTTAATGCGGACTTCAACAACCATGTAAATGAAAAATCTACTCAAATAGATGTTCAAGGAAAAGCCCCATGTTTCCCCTCGTCACCATCAGTTAAAAGTGAGATAGCAGTAACTTCAAATGAATTAAGTCTATCATCACCTGTTCAAATGGTTAGTTCAGGAGCTAGTTCTCATGTTGAAGTCGATATGGATGAATTTAACCACGGGGGCAGCACAGCCAGTGGGCTTCAAGCATCACAAGTTGAGAGTAAGAGCAATGGACTTTCGGTTGCATCTGACAGAGTATCTGATGACGGATATAACTGGAGAAAATATGGGCAAAAACTTGTTAAAGGAAGTGAATTTCCACGAAGTTATTACAAATGTACACATCCCAACTGTGAAGTGAAGAAACTATTTGAACGTTCTCATGATGGGCAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAACCGCCGATACTCTGCTGGAAGTATTATGTCAATGCAAGATGAGAGATCTGATAAGGTTTCTTTTGCTGGTCGAGATGACAAGGTATCCAATATATATGGCCAGGTCTCTCATGTTGCTGAGCCCGGCAGTACTCCAGAGCTGTCACCTGGAGCAGCAAGTGGTGATAGTCCAGAGGGTGCAGGGCTTGCATCAAATAAGATTAATGATGAGCTTGATGATGATGATCCTTTCTCCAAACGAAGAAAAATGGATCTTGGATGTGCTGATATCACTCCTGTAGTTAAGCCTATCCGGGAGCCAAGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGTTGGCGTAAGTATGGGCAGAAGGTTGTGAGAGGCAATCCAAATCCTAGGAGTTACTACAAATGCACCAATGCTGGTTGCCCTGTTAGAAAGCATGTGGAGCGAGCATCTCATGATCCGAAAGCAGTAATAACCACATATGAAGGTAAGCACAATCATGATGTACCAACTGCAAAGAATAGTAGCCATGACATGGCAGGACAAGCTGCATCCATTGGACAGGCAAGAATTAGGCCAGAAGAAAGCGATACGATTAGCCTTGATCTTGGGATGGGCCTTAACCAAGCTGCGGAAAATGGCTCAAGTGGGCAAGGGAGAGTGCCACTTTCTGAATTTGGAGGCAGCCAAACTCACACAAGCAATTCCAGTTTCAAGTTTGTCCATGCTACCTCAGCTCCAGTATACTTCGGTGTTCTAAATAACGGTTCAATTCCATCATATGGTTCTAGAGAAAATCTGAGTGATAGTACATCTTTGAACCACTCTACTTATCCCTGCCCGCAGAACATGGGAAGAATACTAACGGGTCCGTAG 1803 0.4531 MDSAQENSLTELRQSSSGNAAELQSEDPNRYFPQPDAGATSSANAGGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLSKLHQTGHGSVTSAAVSTTFPVTTVCFNTSTVDDRTSSFFEFKAHNRSNMVNADFNNHVNEKSTQIDVQGKAPCFPSSPSVKSEIAVTSNELSLSSPVQMVSSGASSHVEVDMDEFNHGGSTASGLQASQVESKSNGLSVASDRVSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGSIMSMQDERSDKVSFAGRDDKVSNIYGQVSHVAEPGSTPELSPGAASGDSPEGAGLASNKINDELDDDDPFSKRRKMDLGCADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKNSSHDMAGQAASIGQARIRPEESDTISLDLGMGLNQAAENGSSGQGRVPLSEFGGSQTHTSNSSFKFVHATSAPVYFGVLNNGSIPSYGSRENLSDSTSLNHSTYPCPQNMGRILTGP 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00361 600 Gene3D WRKY domain 232 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 Gene3D WRKY domain 404 480 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 ProSiteProfiles WRKY domain profile. 414 479 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 SMART WRKY_cls 244 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 SMART WRKY_cls 419 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 MobiDBLite consensus disorder prediction 517 542 - -
Arst1g00361 600 ProSiteProfiles WRKY domain profile. 239 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 MobiDBLite consensus disorder prediction 1 24 - -
Arst1g00361 600 Pfam WRKY DNA -binding domain 420 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 Pfam WRKY DNA -binding domain 245 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 SUPERFAMILY WRKY DNA-binding domain 411 479 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g00361 600 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 505 IPR044810 GO:0003700
Arst1g00361 600 MobiDBLite consensus disorder prediction 1 45 - -
Arst1g00361 600 FunFam WRKY transcription factor 33 406 472 - -
Arst1g00361 600 FunFam WRKY transcription factor 230 304 - -
Arst1g00361 600 MobiDBLite consensus disorder prediction 518 542 - -
Arst1g00361 600 MobiDBLite consensus disorder prediction 344 386 - -
Arst1g00361 600 SUPERFAMILY WRKY DNA-binding domain 242 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00361 Arst-Chr1 3324497 3330358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00361 53 600 WRKY Transcription Factor Family AT4G26640 55.935 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst1g00361 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00361 - - adu:107464084 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00361 1 3324497 3330358 Arst1g00361 1 3324497 3330358 ECH
Arst1g00361 1 3324497 3330358 Arst7g00341 7 2229900 2234175 PCT