Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00360 ATGCGGATGGAGTCTCCAGATTTCGACGAAGAAGAGGAGATTCCGTTGAAGGAGGAAACTTCCTTTACCTCCTCTTCGTCTTCGCCGACGAAAGGAGGACTAACTCATCACGGTCACAGTCACAGTCACAGTCATGGTAATCATCACAATCACAGTAATCGCAACAGTCATGCTTTCAGTTTCGAGACCACCACGGCGGCCGTGCTCTCTCCAGATTTACCCAAATCTTCTGTATTCAGGCTTTTGCGGATCACACGAATCAGGAGTCTTTATGTAGTCTTAATCAAAGCCAAGATCAACCTACTCCTCCCCTTTGGTCCACTCGCCATTGCCCTCCATTACCTCACCGGAAAACATGGATGGGTGTTCTTCTTCAGCTTGTTGGGTATTGCTCCTTTGGCAGAACGTTTGGGTTATGTTACTGAGCAACTTGCATTCTACACGGGACCAACAGTTGGGGGTCTGCTCAATGCCACATTTGGCAATGCAACCGAAATGATTATATCAATCTTTGCATTGAAAAACGACATGATTAGGGTTGTTCAACAATCGTTACTGGGCTCAATCTTGTCGAATATGCTCCTAGTTCTTGGATGTGCATTCTTTACCGGTGGGATTGTCCACTACAAAAAGGTGCAGGTTTTCAATAAGGCCGCTGCTGTTGTCAATTCCGGGTTGCTGTTGATGGCTGTGATGGGCATACTTTTCCCGGCGGTGCTTCACTTTACTCATTCAGAGGTTCACCTTGGGAAGTCGGTGTTATCTCTATCAAGATTTAGCAGCTGTGTAATGCTAGTCGCGTATGCCAGCTACCTTTTTTTTCAACTTAAGAGCCAGCCCAATCTTTATAGTCCTGTGGATGAGGAAGGAGTTAGTGGTGAAAATTCAGATGAGGAGGAAGAACTTGAATTAACTCAAGCGGAAGCAATAGTCTGGCTTGCTATCTTGACGGCATGGGTATCTTTATTGTCCGGGTACCTTGTAGACGCCATAGAGGGAGCATCTGAGTCATTAAATATGTCGATGGCATTTATCAGTGTCATCTTGCTCCCAATTGTTGGCAATGCTGCAGAACATGCAAGTGCTATCATGTTTGCCATGAAGGACAAACTTGATATCACCATTGGAGTTGCTGTTGGATCATCTACACAGATATCTATGTTTGTGATCCCATTCTGTGTGGTTGTTGGATGGTGTATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACGGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAACTATTTTAAAGGCTTGATGCTTATATTATGCTATCTTATTGTCGCTGCCAGTTTCTTCGTACATGTAGACCCTAAAACTGGTGATGACTAG 1389 0.4449 MRMESPDFDEEEEIPLKEETSFTSSSSSPTKGGLTHHGHSHSHSHGNHHNHSNRNSHAFSFETTTAAVLSPDLPKSSVFRLLRITRIRSLYVVLIKAKINLLLPFGPLAIALHYLTGKHGWVFFFSLLGIAPLAERLGYVTEQLAFYTGPTVGGLLNATFGNATEMIISIFALKNDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCVMLVAYASYLFFQLKSQPNLYSPVDEEGVSGENSDEEEELELTQAEAIVWLAILTAWVSLLSGYLVDAIEGASESLNMSMAFISVILLPIVGNAAEHASAIMFAMKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKTGDD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00360 462 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 457 IPR004713 GO:0006812|GO:0008324|GO:0016020
Arst1g00360 462 NCBIfam calcium/proton exchanger 92 452 - -
Arst1g00360 462 NCBIfam calcium/proton exchanger 102 452 IPR004798 GO:0006816|GO:0015369
Arst1g00360 462 MobiDBLite consensus disorder prediction 19 35 - -
Arst1g00360 462 FunFam Vacuolar cation/proton exchanger 297 453 - -
Arst1g00360 462 FunFam Vacuolar cation/proton exchanger 150 289 - -
Arst1g00360 462 Gene3D - 150 453 IPR044880 -
Arst1g00360 462 MobiDBLite consensus disorder prediction 1 55 - -
Arst1g00360 462 MobiDBLite consensus disorder prediction 36 52 - -
Arst1g00360 462 Pfam Sodium/calcium exchanger protein 310 449 IPR004837 GO:0016020|GO:0055085
Arst1g00360 462 Pfam Sodium/calcium exchanger protein 121 276 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00360 Arst-Chr1 3278777 3286352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00360 70 457 Antiporters AT3G13320 74.036 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00360 K07300 - gmx:100806000 671.003