Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00334 GATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCAAACACAAAGCTCTCCAGCAACAAAACTGTTAGGAGGATCAGGGTTCGAGGTGGGAATGTAAAATGGCGTGCTTTGAGGCTTGACACTGGGAACTACTCTTGGGGTAGTGAAGCTGTGACTCGCAAAACGAGGATTCTTGATGTGGTGTATAATGCATCCAACAATGAACTTGTTCGAACTCAGACTTTGGTCAAGAGTGCCATCGTCCAGGTTGATGCTGCACCTTTCAAACAATGGTATCTCCAGCATTATGGTGTCGACATTGGTCGCAAGAAGAAGGGTGCAACTTCTGGCAAGAAAGAAGGGGAGGATGCTGAAACTGCAACCGAAGAAGTGAAGAAGAGTAACCATGTCTTGAGAAAGTTGGAGAAGCGTAAACAAACCCGGGTGCTTGATCCTCACATTGAAGAACAATTTGGAAGTGGTCGCCTCTTGGCTAGTATCTCATCCCGCCCCGGTCAATGTGGTCGTGCTGATGGATATATATTGGAGGGCAAAGAGCTTGAGTTCTACATGAAGAAGCTTCAGAAAAAGAAGGGCAAGGGTGCTGCTTAA 642 0.472 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSGKKEGEDAETATEEVKKSNHVLRKLEKRKQTRVLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00334 218 Gene3D - 32 161 - -
Arst1g00334 218 Gene3D - 162 215 - -
Arst1g00334 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Arst1g00334 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Arst1g00334 218 FunFam 40S ribosomal protein S8 162 215 - -
Arst1g00334 218 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Arst1g00334 218 Coils Coil 139 159 - -
Arst1g00334 218 FunFam 40S ribosomal protein S8 32 161 - -
Arst1g00334 218 MobiDBLite consensus disorder prediction 1 22 - -
Arst1g00334 218 CDD Ribosomal_S8e_like 5 197 - -
Arst1g00334 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Arst1g00334 218 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00334 Arst-Chr1 3105095 3107119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00334 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.951 3.75e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00334 K02995 - gmx:100527325 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00334 1 3105095 3107119 Arst1g00334 1 3105095 3107119 ECH