Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00316 ATGCCTTCGGCAAATGATTTAGTAAATCAGAAGGCTTTGATGAGTGAAGCAGCCAAGAGGGATGCTTTGTTGGCTAAGTCCAAGCTTTTACCCATGGCTCTGGAGGGTAACCTGGGGGCTAAGAAACTTTTTGATGAGGAGCTAAAAGATTTGGCACGGCCTGGATTTATAATTGATGATGATGTTGATGATGACATGACTGATGCAAATGATGAAGAGTCAGATGAAGAAGATGAATTGTTTGATTCTCTTTGTTCTATTTGTGACGATGGTGGTAATCTTTTGTGCTGTGATGGAAAGTGCATGAGATCATTTCATGCTAATAAGGAGGATGGCGTCAACTCTTCTTGTGTCTCTCTTGGTTTTAGCCAAAAGGAAGTTGAAGACATCCCAAATTTTTATTGCAAGAATTGTGAACATAATCAGCATCAGTGCTTTGCATGTGGCAAACTAGGCTGTTCCGATAAATTCTCTGGTGCTGAGGTCTTCCAATGTGCCTCTGCAACCTGCGGCTACTTTTATCATCCTCAATGTGTTGTGAAGTTACTTCATCGATTTAATGAGAATGCTTCAAGGGAACTTGAGACAAATATTAGTCGGGGAGAACCTTTTACTTGTCCATCCCATTACTGCTATGTTTGTAAAGAAACAGAGAACAAAAAGGAACATGAGTTGCAGCTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGCAAATGTTTGCCAAGAGCAATTGCTTTTGAAGACATAGAAGATGAGGGTATAATAACGAGGGCCTGGGACAATCTAATACCCAATCGTGTTCTTATATATTGCTTAAAACATGATATCGATAATGATCTTGGGACTCCTATACGAGATCACATAACATTCCCCAATGATAAATCTAATGTTCAAGAAGCAAGTACAGAGCAGAAGAGAAAACCTGCAACTGAAGAGAGAGTTATGTTGAACAAGAATAATGTTAACCTGGATAATTCAGTCAACAAAAGAAGCATTGCTGATGTACCTAAACTGTCTACTAAGGTACCTAAACTCGCTGGAAAAAAGTCTTCTGGACCAGTTGGTATCAAGAAGTTTAATAAGGTTTCAGGATCAAATATCCAAAGGAAACCAATAGATATTGAATCATCTAGAAAACGTTTGTGTGAAAGTAAGAGACCATTCTCAAAGGAAACTGAAAGGCCTGATTGTGAGGAAAATGAGCCCTCAATTGGTGTGCAATTATATGCAATCTGGGAGAAGGGTTCTGGACAAACTGGCTTGGGCAATCAGGTTGATAACAAAGCCAGTGCCAAATCTGTTATACCTACTAGAAAACCAAGCAGCCCATTATGTACATTAGATGCTGATTCGAAGAGGAGACTGTTGGATTTGTTTAATGAAGCTACGTCATCAGTTACTCTTAAGGATGTTGTAAAAGAACGTAAATTTGCTTACACTCATTCTCACTCATTGAAAAATTTTATGGAGAAGACTACAGTTGGGAAGTTGGAGCGCTCTGTTGAGGCTGTTCGAACAGCTTTAAAGATGCTAGAGGATGGGCGCAGCATTCGTGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTTAACCAGATATATAAGTGGAAGGACAAGCTGAAAGTATATCTAGCACCTGTTCTGTGTGGTAACCGCTATACGTCATTTGGTCGCCATTTTACACAAGTGGAAAAGCTAGAAGGGATTGTTGATAGACTCCACTGGTATGTTCAGAATGGTGATACGATTGTGGACTTCTGTTGTGGTGCTAACGACTTTAGCATACTTATGAAAAAAAAGCTTGAAGAAACTGGGAAGAGATGCTCGTATAAGAACTATGATTTACTTCCAACAAAGCACGATTTTTGTTTTGAGATGAGAGATTGGATGACTGTCCAGCCAAAGGAGTTGCCTACAGGGTCACAGTTGATCATGGGTCTTAATCCGCCCTTTGGGCTAAAAGCAGCTTTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAGACCAAAGCTCCTCATTCTTATAGTTCCACCGGAAACAGAGAGGCTAGACAAAAAAAGGTCACGTTATGATCTTGTCTGGGAGGATCGAAATTTTCTATCAGGAAAGTCATTTTATCTACCCGGATCAATTAATACTAGTGACAGACAAATGGAACAATGGAATCTGACATCTCCCCCACTCTCCCTTTGGAGTCGACCTGACTGGACTGATAAGCATATGGAAGTAGCGCAAAAGCACGGTCATCTGTTAAGCCTGCATGAAGTATCACGGATGGAAAGTTTTAATAATCAAAATTCACGTGCTGGCCATTCGATGGATGGTAATTTTGCTGACGACGATATGCTGGTTGATGATCTGTTGGTGTCAACTGATGATCTTGAAGTTCAGGGGCTTATTAATGACGATCAGCAAGAAATATCACTGGATGGAAATGTTGAAAGAGAGAGTCAAGAGAGACATGAATCTTGGACGGAAATGACTCCAAATGAAAATGTTGGACGTGAGAGTCAAGAGAGACATGATTATTTAATGCGAAAGACTCCACATGGAAATGTTGAACAAGAGAGACATGAGGATCATACTCGAAGGAGTCCGCATGAATATGTTGAACGTGAGAGTCAAGAGCGACATGATTACCGGATGGGAAAGTCTCCTCATGGAATTGTTGAACGAGACAGTCAGGAGAGACACGAGGATCAGATAGGAAAGAGTCCACATGGAAATGTTGAACGTGAGAGTCAAGAGCGACATGATCACAGGATGGGAAAGACTCCTCATGGAATTGTTGAACGAGAGCGGCATGATTACAGGATGGGAAAGACTCCTCAAGGAATTGTTGAACTAGAGAGTCAAGAGAGACACGAGGATCAGATAGGAAAGACTCCACATGGAAATGTTGAACGCGAGAGTCAAGAGCGACATGATTACAGGATGGGAAAGACTCCTCATGGAATTGTTGAACGAGAGAGTCAAGAGCGGCATGATTACAGGATGGGAAAGACTAAGACCTCATGGAACAGGAAACACACTGAGGAAAACAACAGAGGAGGTCCGCATGCGAGCTCACCTGCCAAAAGTAATGCGAAAAATCAAACTAAGGGATTACCTCACCGTAGTCAATCTAATCCGAAAGATGGGAGATCCTCAGTTGGGGGTCTTCAGCCAAAGTCTAGTGTGTCATCTCCCTATGGTTATGGTCATCTGGAACCCATGCGATTTGGAGCAGCTAGTGATTATATGGCTTCCACTTTCGAGGAGCACCATAGCAGCCTTTTGATAGATGGCACCAATACCCTAGGATATAACCCCTATGTTGGGGAGGATGACAGTTATCTGAGGCAACAACCTCGCCTTTATGGGCTTCAGGATCCAGATTCTCATTATATGACGAGTAATTTTTTATCTGGTCATGATTCTGTGTATGGTCGTATGGGATCCAGTTATGGAGTACTTGGTTCGGGATCCGAGTCAGCTTACATGATGAGCACTCCAGCTATGCAACGGTACGCTTCGCGCTTGGATCCTAGGCTGGATTCTTTTGGATCTGTACCCCCTATGGTTGGTAGAAATGCCGGCTTTGAACACGGTGTTCCCCAACCTGAATATGGAAGTGGGATGCCTAGTGGTATGCCAGGTTTTGCACCTCAACCTCAGGATCCCTATCGCTATCCCAATTCGCGCTCGAATTCAGGAAGTTGGTTCAATGGGTAA 3720 0.4237 MPSANDLVNQKALMSEAAKRDALLAKSKLLPMALEGNLGAKKLFDEELKDLARPGFIIDDDVDDDMTDANDEESDEEDELFDSLCSICDDGGNLLCCDGKCMRSFHANKEDGVNSSCVSLGFSQKEVEDIPNFYCKNCEHNQHQCFACGKLGCSDKFSGAEVFQCASATCGYFYHPQCVVKLLHRFNENASRELETNISRGEPFTCPSHYCYVCKETENKKEHELQLAVCRRCPKSYHRKCLPRAIAFEDIEDEGIITRAWDNLIPNRVLIYCLKHDIDNDLGTPIRDHITFPNDKSNVQEASTEQKRKPATEERVMLNKNNVNLDNSVNKRSIADVPKLSTKVPKLAGKKSSGPVGIKKFNKVSGSNIQRKPIDIESSRKRLCESKRPFSKETERPDCEENEPSIGVQLYAIWEKGSGQTGLGNQVDNKASAKSVIPTRKPSSPLCTLDADSKRRLLDLFNEATSSVTLKDVVKERKFAYTHSHSLKNFMEKTTVGKLERSVEAVRTALKMLEDGRSIRDAEAVCGPDVLNQIYKWKDKLKVYLAPVLCGNRYTSFGRHFTQVEKLEGIVDRLHWYVQNGDTIVDFCCGANDFSILMKKKLEETGKRCSYKNYDLLPTKHDFCFEMRDWMTVQPKELPTGSQLIMGLNPPFGLKAALANKFIDKALEFRPKLLILIVPPETERLDKKRSRYDLVWEDRNFLSGKSFYLPGSINTSDRQMEQWNLTSPPLSLWSRPDWTDKHMEVAQKHGHLLSLHEVSRMESFNNQNSRAGHSMDGNFADDDMLVDDLLVSTDDLEVQGLINDDQQEISLDGNVERESQERHESWTEMTPNENVGRESQERHDYLMRKTPHGNVEQERHEDHTRRSPHEYVERESQERHDYRMGKSPHGIVERDSQERHEDQIGKSPHGNVERESQERHDHRMGKTPHGIVERERHDYRMGKTPQGIVELESQERHEDQIGKTPHGNVERESQERHDYRMGKTPHGIVERESQERHDYRMGKTKTSWNRKHTEENNRGGPHASSPAKSNAKNQTKGLPHRSQSNPKDGRSSVGGLQPKSSVSSPYGYGHLEPMRFGAASDYMASTFEEHHSSLLIDGTNTLGYNPYVGEDDSYLRQQPRLYGLQDPDSHYMTSNFLSGHDSVYGRMGSSYGVLGSGSESAYMMSTPAMQRYASRLDPRLDSFGSVPPMVGRNAGFEHGVPQPEYGSGMPSGMPGFAPQPQDPYRYPNSRSNSGSWFNG 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00316 1239 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 2 767 - -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 950 1018 - -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 1199 1239 - -
Arst1g00316 1239 SMART PHD_3 84 139 IPR001965 -
Arst1g00316 1239 SMART PHD_3 144 210 IPR001965 -
Arst1g00316 1239 SMART PHD_3 211 277 IPR001965 -
Arst1g00316 1239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 260 IPR013083 -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 835 943 - -
Arst1g00316 1239 CDD PHD2_NSD 144 209 - -
Arst1g00316 1239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 141 IPR013083 -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 1019 1064 - -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 813 828 - -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 1224 1239 - -
Arst1g00316 1239 SUPERFAMILY FYVE/PHD zinc finger 197 247 IPR011011 -
Arst1g00316 1239 MobiDBLite consensus disorder prediction 813 1066 - -
Arst1g00316 1239 CDD PHD3_NSD 210 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00316 Arst-Chr1 2890709 2903342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00316 73 185 PHD Transcription Factor Family AT3G14980 29.204 7.61e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00316 - - aip:107622338 2437.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00316 1 2890709 2903342 Arst1g00316 1 2890709 2903342 ECH