Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00315 ATGGCATCTTCGGATGATGAGCCAGAGTCTCATCCACTATCTGTCTCGAATTACCACTTTGAAGATGACAGGGATGCCCCTGTATCGTTTTCTGTGATGCCAATTCAATGGAGTGGGTCGGAGAGTCCTCAAGGCAAGAAAACAGAGTTGTTCCTCCACGGTGTGGCGGATAATGGGCTGCAGAAGGTTATGATGCCGGTCATGGCGTGGCGGTTCGAGCTTTCCTCTGTGAAGCCTGAGATATCTGTGCTGTCATCCAAGGATAGGAGATGGATCAAACTTGAGAAGCCAAGAAAGAGCTATGAGGACATTGTAAGGAGTATTTTGGTAACTGTTTACTTCCTGAGTTTTGCAAAGAAGAATCCTGATGCAACCGCGAAAGCTGCGTGGGATAGCTTGAGTAAGAATAAGGAGTTTAGCTCTTACGAGGTTATGCCTTCGGCAAATGATTTAGTAAATCAGAAGGCTTTGATGAGTGAAGCAGCCAAGAGGGATGCTTTGTTGGCTAAGTCCAAGCTTTTACCCATGGCTCTGGAGGGTAACCTGGGGGCTAAGAAACTTTTTGATGAGGAGCTAAAAGATTTGGCACGGCCTGGATTTATAATTGATGATGATGTTGATGATGACATGACTGATGCAAATGATGAAGAGTCAGATGAAGAAGATGAATTGTTTGATTCTCTTTGTTCTATTTGTGACGATGGTGGTAATCTTTTGTGCTGTGATGGAAAGTGCATGAGATCATTTCATGCTAATAAGGAGGATGGCGTCAACTCTTCTTGTGTCTCTCTTGGTTTTAGCCAAAAGGAAGTTGAAGACATCCCAAATTTTTATTGCAAGAATTGTGAACATAATCAGCATCAGTGCTTTGCATGTGGCAAACTAGGCTGTTCCGATAAATTCTCTGGTGCTGAGGTCTTCCAATGTGCCTCTGCAACCTGCGGCTACTTTTATCATCCTCAATGTGTTGTGAAGTTACTTCATCGATTTAATGAGAATGCTTCAAGGGAACTTGAGACAAATATTAGTCGGGGAGAACCTTTTACTTGTCCATCCCATTACTGCTATGTTTGTAAAGAAACAGAGAACAAAAAGGAACATGAGTTGCAGCTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGCAAATGTTTGCCAAGAGCAATTGCTTTTGAAGACATAGAAGATGAGGGTATAATAACGAGGGCCTGGGACAATCTAATACCCAATCGTGTTCTTATATATTGCTTAAAACATGATATCGATAATGATCTTGGGACTCCTATACGAGATCACATAACATTCCCCAATGATAAATCTAATGTTCAAGAAGCAAGTACAGAGCAGAAGAGAAAACCTGCAACTGAAGAGAGAGTTATGTTGAACAAGAATAATGTTAACCTGGATAATTCAGTCAACAAAAGAAGCATTGCTGATGTACCTAAACTGTCTACTAAGGTACCTAAACTCGCTGGAAAAAAGTCTTCTGGACCAGTTGGTATCAAGAAGTTTAATAAGGTTTCAGGATCAAATATCCAAAGGAAACCAATAGATATTGAATCATCTAGAAAACGTTTGTGTGAAAGTAAGAGACCATTCTCAAAGGAAACTGAAAGGCCTGATTGTGAGGAAAATGAGCCCTCAATTGGTGTGCAATTATATGCAATCTGGGAGAAGGGTTCTGGACAAACTGGCTTGGGCAATCAGGTTGATAACAAAGCCAGTGCCAAATCTGTTATACCTACTAGAAAACCAAGCAGCCCATTATGTACATTAGATGCTGATTCGAAGAGGAGACTGTTGGATTTGTTTAATGAAGCTACGTCATCAGTTACTCTTAAGGATGTTGTAAAAGAACGTAAATTTGCTTACACTCATTCTCACTCATTGAAAAATTTTATGGAGAAGACTACAGTTGGGAAGTTGGAGCGCTCTGTTGAGGCTGTTCGAACAGCTTTAAAGATGCTAGAGGATGGGCGCAGCATTCGTGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTTAACCAGATATATAAGTGGAAGGACAAGCTGAAAGTATATCTAGCACCTGTTCTGTGTGGTAACCGCTATACGTCATTTGGTCGCCATTTTACACAAGTGGAAAAGCTAGAAGGGATTGTTGATAGACTCCACTGGTATGTTCAGAATGGTGATACGATTGTGGACTTCTGTTGTGGTGCTAACGACTTTAGCATACTTATGAAAAAAAAGCTTGAAGAAACTGGGAAGAGATGCTCGTATAAGAACTATGATTTACTTCCAACAAAGCACGATTTTTGTTTTGAGATGAGAGATTGGATGACTGTCCAGCCAAAGGAGTTGCCTACAGGGTCACAGTTGATCATGGGTCTTAATCCGCCCTTTGGGCTAAAAGCAGCTTTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAGACCAAAGCTCCTCATTCTTATAGTTCCACCGGAAACAGAGAGGCTAGACAAAAAAAGGTCACGTTATGATCTTGTCTGGGAGGATCGAAATTTTCTATCAGGAAAGTCATTTTATCTACCCGGATCAATTAATACTAGTGACAGACAAATGGAACAATGGAATCTGACATCTCCCCCACTCTCCCTTTGGAGTCGACCTGACTGGACTGATAAGCATATGGAAGTAGCGCAAAAGCACGGTCATCTGTTAAGCCTGCATGAAGTATCACGGATGGAAAGTTTTAATAATCAAAATTCACGTGCTGGCCATTCGATGGATGGTAATTTTGCTGACGACGATATGCTGGTTGATGATCTGTTGGTGTCAACTGATGATCTTGAAGTTCAGGGGCTTATTAATGACGATCAGCAAGAAATATCACTGGATGGAAATGTTGAAAGAGAGAGTCAAGAGAGACATGAATCTTGGACGGAAATGACTCCAAATGAAAATGTTGGACGTGAGAGTCAAGAGAGACATGATTATTTAATGCGAAAGACTCCACATGGAAATGTTGAACAAGAGAGACATGAGGATCATACTCGAAGGAGTCCGCATGAATATGTTGAACGTGAGAGTCAAGAGCGACATGATTACCGGATGGGAAAGTCTCCTCATGGAATTGTTGAACGAGACAGTCAGGAGAGACACGAGGATCAGATAGGAAAGAGTCCACATGGAAATGTTGAACGTGAGAGTCAAGAGCGACATGATCACAGGATGGGAAAGACTCCTCATGGAATTGTTGAACGAGAGCGGCATGATTACAGGATGGGAAAGACTCCTCAAGGAATTGTTGAACTAGAGAGTCAAGAGAGACACGAGGATCAGATAGGAAAGACTCCACATGGAAATGTTGAACGCGAGAGTCAAGAGCGACATGATTACAGGATGGGAAAGACTCCTCATGGAATTGTTGAACGAGAGAGTCAAGAGCGGCATGATTACAGGATGGGAAAGACTAAGACCTCATGGAACAGGAAACACACTGAGGAAAACAACAGAGGAGGTCCGCATGCGAGCTCACCTGCCAAAAGTAATGCGAAAAATCAAACTAAGGGATTACCTCACCGTAGTCAATCTAATCCGAAAGATGGGAGATCCTCAGTTGGGGGTCTTCAGCCAAAGTCTAGTGTGTCATCTCCCTATGGTTATGGTCATCTGGAACCCATGCGATTTGGAGCAGCTAGTGATTATATGGCTTCCACTTTCGAGGAGCACCATAGCAGCCTTTTGATAGATGGCACCAATACCCTAGGATATAACCCCTATGTTGGGGAGGATGACAGTTATCTGAGGCAACAACCTCGCCTTTATGGGCTTCAGGATCCAGATTCTCATTATATGACGAGTAATTTTTTATCTGGTCATGATTCTGTGTATGGTCGTATGGGATCCAGTTATGGAGTACTTGGTTCGGGATCCGAGTCAGCTTACATGATGAGCACTCCAGCTATGCAACGGTACGCTTCGCGCTTGGATCCTAGGCTGGATTCTTTTGGATCTGTACCCCCTATGGTTGGTAGAAATGCCGGCTTTGAACACGGTGTTCCCCAACCTGAATATGGAAGTGGGATGCCTAGTGGTATGCCAGGTTTTGCACCTCAACCTCAGGATCCCTATCGCTATCCCAATTCGCGCTCGAATTCAGGAAGTTGGTTCAATGGGTAA 4152 0.4285 MASSDDEPESHPLSVSNYHFEDDRDAPVSFSVMPIQWSGSESPQGKKTELFLHGVADNGLQKVMMPVMAWRFELSSVKPEISVLSSKDRRWIKLEKPRKSYEDIVRSILVTVYFLSFAKKNPDATAKAAWDSLSKNKEFSSYEVMPSANDLVNQKALMSEAAKRDALLAKSKLLPMALEGNLGAKKLFDEELKDLARPGFIIDDDVDDDMTDANDEESDEEDELFDSLCSICDDGGNLLCCDGKCMRSFHANKEDGVNSSCVSLGFSQKEVEDIPNFYCKNCEHNQHQCFACGKLGCSDKFSGAEVFQCASATCGYFYHPQCVVKLLHRFNENASRELETNISRGEPFTCPSHYCYVCKETENKKEHELQLAVCRRCPKSYHRKCLPRAIAFEDIEDEGIITRAWDNLIPNRVLIYCLKHDIDNDLGTPIRDHITFPNDKSNVQEASTEQKRKPATEERVMLNKNNVNLDNSVNKRSIADVPKLSTKVPKLAGKKSSGPVGIKKFNKVSGSNIQRKPIDIESSRKRLCESKRPFSKETERPDCEENEPSIGVQLYAIWEKGSGQTGLGNQVDNKASAKSVIPTRKPSSPLCTLDADSKRRLLDLFNEATSSVTLKDVVKERKFAYTHSHSLKNFMEKTTVGKLERSVEAVRTALKMLEDGRSIRDAEAVCGPDVLNQIYKWKDKLKVYLAPVLCGNRYTSFGRHFTQVEKLEGIVDRLHWYVQNGDTIVDFCCGANDFSILMKKKLEETGKRCSYKNYDLLPTKHDFCFEMRDWMTVQPKELPTGSQLIMGLNPPFGLKAALANKFIDKALEFRPKLLILIVPPETERLDKKRSRYDLVWEDRNFLSGKSFYLPGSINTSDRQMEQWNLTSPPLSLWSRPDWTDKHMEVAQKHGHLLSLHEVSRMESFNNQNSRAGHSMDGNFADDDMLVDDLLVSTDDLEVQGLINDDQQEISLDGNVERESQERHESWTEMTPNENVGRESQERHDYLMRKTPHGNVEQERHEDHTRRSPHEYVERESQERHDYRMGKSPHGIVERDSQERHEDQIGKSPHGNVERESQERHDHRMGKTPHGIVERERHDYRMGKTPQGIVELESQERHEDQIGKTPHGNVERESQERHDYRMGKTPHGIVERESQERHDYRMGKTKTSWNRKHTEENNRGGPHASSPAKSNAKNQTKGLPHRSQSNPKDGRSSVGGLQPKSSVSSPYGYGHLEPMRFGAASDYMASTFEEHHSSLLIDGTNTLGYNPYVGEDDSYLRQQPRLYGLQDPDSHYMTSNFLSGHDSVYGRMGSSYGVLGSGSESAYMMSTPAMQRYASRLDPRLDSFGSVPPMVGRNAGFEHGVPQPEYGSGMPSGMPGFAPQPQDPYRYPNSRSNSGSWFNG 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00315 1383 SMART PHD_3 355 421 IPR001965 -
Arst1g00315 1383 SMART PHD_3 288 354 IPR001965 -
Arst1g00315 1383 SMART PHD_3 228 283 IPR001965 -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 1343 1383 - -
Arst1g00315 1383 SUPERFAMILY FYVE/PHD zinc finger 341 391 IPR011011 -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 979 1087 - -
Arst1g00315 1383 CDD PHD2_NSD 288 353 - -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 1163 1208 - -
Arst1g00315 1383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 402 IPR013083 -
Arst1g00315 1383 CDD PHD3_NSD 354 420 - -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 957 1210 - -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 1368 1383 - -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 957 972 - -
Arst1g00315 1383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 285 IPR013083 -
Arst1g00315 1383 MobiDBLite consensus disorder prediction 1094 1162 - -
Arst1g00315 1383 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 911 - -
Arst1g00315 1383 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 911 - -
Arst1g00315 1383 Pfam Cytosine specific DNA methyltransferase replication foci domain 15 122 IPR022702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00315 Arst-Chr1 2890709 2903805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00315 217 329 PHD Transcription Factor Family AT3G14980 29.204 7.63e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00315 - - aip:107622338 2719.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00315 1 2890709 2903805 Arst7g00363 7 2333076 2337934 PCT