Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00237 ATGACTTATGAGGTCTCCACTTGGATTTTAGCCACTATAGTGTCTGTTGATGTTGGCACCCGCGATTGGTATTATGCCTCGTGTAAGAATTGTCCTAGAAAAGTTGTGGAGAATAAAGGTCGATATTATTGTGAGCATTGTCGAAAAGTGGGATTTAATGCTCCATTGAGGTATCGACTTAATGTTGTAGTCATTGATGGGACTGGATGCATTAATATAATGCTTTGGAATCAAGAGGCAAAAATCATTCTCGGAAAATCTGCTAATGACATAAGGGATCTAATGAAAGATGGTGATGAGAATGCCTGCTTAAAAGCTTTTGAACCTATAATTGATAGGAAGTTTCTTTTTAAATTGTCTATCTCACAGAAAAATCTGACCTCTGTGGACCAAGCTTATAATGCTGTTAAGATTAGTGATGATGAGGCACTGATTGATCTCTATTCATCCCACAGTTCTTCCATAGATATTGGAGTTCGTATTTAA 486 0.3704 MTYEVSTWILATIVSVDVGTRDWYYASCKNCPRKVVENKGRYYCEHCRKVGFNAPLRYRLNVVVIDGTGCINIMLWNQEAKIILGKSANDIRDLMKDGDENACLKAFEPIIDRKFLFKLSISQKNLTSVDQAYNAVKISDDEALIDLYSSHSSSIDIGVRI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00237 161 Pfam Replication factor-A C terminal domain 19 129 IPR013955 -
Arst1g00237 161 CDD RPA1_DBD_C 9 141 IPR047192 -
Arst1g00237 161 Gene3D - 2 147 IPR012340 -
Arst1g00237 161 SUPERFAMILY Nucleic acid-binding proteins 7 139 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00237 Arst-Chr1 2192375 2194324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00237 23 137 Core DNA Replication Machinery Family AT5G08020 35.897 5.42e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00237 - - adu:107487627 330.487