Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00233 ATGAATAAGGATGCAGAGAATGATGCAAACAGTTTCACTGCAATGGGGAAATGCGTGGGAGATGGTGGCAATAATAGTGGTGGCGAAGACGGTGGTGGGGCGACAGCGACAGGCGAGGTGGCTTTGAAAAAGGGTCCTTGGACGACAATAGAAGATGCAATTCTAGTTGATTACGTGACAAAGCACGGTGAAGGAAATTGGAATGCAGTGCAAAGGAACACAGGGTTGGCTCGATGTGGAAAAAGTTGCAGGTTGAGATGGACAAACCATTTGAGACCAAATCTGAAGAAAGGTGCTTTCTCACCTGAAGAAGAAAAGCTCATCATTGAATTCCATTCTCAGTTTGGCAACAAATGGGCTCGAATGGCTGCTTTGTTGCCTGGAAGAACTGACAACGAAATAAAAAATTATTGGAATACAAGGGTGAAGAGAAGGCAAAGGCAAGGTCTTCCTCTATACTCAGATGACCCTAATCGTTCCATTACTACAAGTACACCCACCACCAATGTAACCTATGTCGGTGAAAACTTCACCAACAACGCTCCCATAACCATGTTCGAGTTTATCAAACAGAGTTATCCTCATTCTCCATCTCCACGACATCATTCTCCTTTAACTTCTCCGCTACAACACAGGGCATCATCCTATTCTCATATGCTTTCCCCTCTATCCTCTCCAGCTCACTCCCCATTGTCCTCACCTGCAACTTCTTTGCCTCTCTCCTTCACCTTCCAGAGACCTGCACCATTGTTGTACAACCCTCTTAGCTTCAAGCGTTACCGCTCAACCCCAAGTTGTAACCCTAATACCTCCCCTATGATGAATAATCCAACCCACTTATCTGACATTGATAATGGGTTCCAATTCCCAATGCAGCTCAATTCGTCTTCTTTCTCCCACTTCTTTCAAAATCCGACGTTGTTGGATCTTGAAAGAAGTGGGTCCTCGTTGACGTCTTCTCCATCTAATGCTCAAAGCAAGATGCAACTTCTTTCGAATCAAATTCCGTTGTCGTTGCAAACGCAACAAATGGAGCCATTGGAAGTTAATTACGATATTGAGTACAATAATGACCCTAATTCTTTGAGTGCAAGTAATAGGTTGTTTGGGGATTTTCTATCAGAAACTCAACCCTCGACTTCTGGCCATCAGATTTTAAAGAAACGAAATTATCTGGGCTTAGATGAACGAGACAATAATGTGTTTGATTGCTGCCAAAGCTTTGATGACTCTCCTCTTAGCTCCCTTTATGGCTCTTCTAATCCAGTACTAAAACAGAAGGAAGAAGCAACTAACCTAAACCAATCCATGAATGAGGATTTATCAACATTTCTCACTGTAGTGCCTTCAATCATGCAAGACCAGCAAAATTGGCAATATAATTATTCAACAGAAGTTTCCGATAATGTCCAATCTTCTCATGTCATCATAGATGACAATTTTGGATTTGATATCAAGCCCAAACCTTCATTGTTTCCTCTTAGTATTGCTACAAACCATAATGATAATAGAGGATGTTACACATGGGATAATTTATCTAGCCAATGTTAA 1551 0.4184 MNKDAENDANSFTAMGKCVGDGGNNSGGEDGGGATATGEVALKKGPWTTIEDAILVDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLIIEFHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDPNRSITTSTPTTNVTYVGENFTNNAPITMFEFIKQSYPHSPSPRHHSPLTSPLQHRASSYSHMLSPLSSPAHSPLSSPATSLPLSFTFQRPAPLLYNPLSFKRYRSTPSCNPNTSPMMNNPTHLSDIDNGFQFPMQLNSSSFSHFFQNPTLLDLERSGSSLTSSPSNAQSKMQLLSNQIPLSLQTQQMEPLEVNYDIEYNNDPNSLSASNRLFGDFLSETQPSTSGHQILKKRNYLGLDERDNNVFDCCQSFDDSPLSSLYGSSNPVLKQKEEATNLNQSMNEDLSTFLTVVPSIMQDQQNWQYNYSTEVSDNVQSSHVIIDDNFGFDIKPKPSLFPLSIATNHNDNRGCYTWDNLSSQC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00233 516 FunFam MYB-related transcription factor 43 96 - -
Arst1g00233 516 CDD SANT 99 140 IPR001005 -
Arst1g00233 516 Pfam Myb-like DNA-binding domain 97 140 IPR001005 -
Arst1g00233 516 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Arst1g00233 516 SUPERFAMILY Homeodomain-like 42 138 IPR009057 -
Arst1g00233 516 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
Arst1g00233 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 91 IPR017930 -
Arst1g00233 516 FunFam Transcription factor GAMYB 99 145 - -
Arst1g00233 516 MobiDBLite consensus disorder prediction 196 232 - -
Arst1g00233 516 Gene3D - 43 96 - -
Arst1g00233 516 SMART sant 43 93 IPR001005 -
Arst1g00233 516 SMART sant 96 144 IPR001005 -
Arst1g00233 516 CDD SANT 46 91 IPR001005 -
Arst1g00233 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 146 IPR017930 -
Arst1g00233 516 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Arst1g00233 516 MobiDBLite consensus disorder prediction 194 232 - -
Arst1g00233 516 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 470 - -
Arst1g00233 516 Gene3D - 99 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00233 Arst-Chr1 2163859 2165881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00233 31 499 MYB Transcription Factor Family AT4G26930 37.395 1.50e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g00233 Myb_DNA-binding 3.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00233 - - ahf:112723793 932.939