Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00232 ATGGAAAATATTAATAAAGATGCAGAGAACGATGCAAACAGTTTCACTGCAATGAGGGGAAGCATGGAAGCAGGTGACGGCTGCTGTGGCGATAGCGGTGGTGCGACAGCGGCGGGAGATGAGGTGGCTTTGAAAAAAGGTCCTTGGACAGCCGCAGAGGATGCAATTTTAGTTGATTACGTAACGAAACACGGTGAAGGGAACTGGAACGCCGTACAAAGAAACACAAAGTTGGCTCGATGTGGAAAGAGTTGTCGGCTAAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAAGGTGCTTTCTCCCCTGAAGAAGAAAAGCTCATCATTGAACTCCATGCTCAATTTGGAAACAAATGGGCTCGAATGGCTGCATTGTTGCCCGGAAGAACTGACAACGAAATAAAGAATTATTGGAACACAAGGGTGAAGCGGAGGCAAAGGCAAGGGCTTCCTCTGTACTCAGATGACCCTGATCGTCCGACTATATCAAGCACACCCACCACCCCTATAACTCATCTAGGAACAAACTTCATCAACAATTCTCCCACAAGCAAGTTTGAGTTTCTCCACCACCAAAGTTATCTTCATTCTCCATCTCCGCATCATCACCACCACCTCAACCATTCTCCTTTAACATCACCACTTCACAGAGCTCCGTCTTATTCCCCTTTATCCTCTTCATCACTTCACACACCACTCTCCACTCCCATTTCATCTTCACCTCTCTCCTTCACCTTCCATAGACCTGCACCCTTGTTGTGCAACCCTCTTCGCTTTAAGCGTTACCGTTCAACTTCAACTGTGAATCCAACCACACCAACCACGCCAACCCACTTATCTGATCTTGATAATGGGTTTAGGTTCCCAGTTCATCTCAACTCTTCTTCTTCTTCTTCTTTCTCCCATTTCTTTCAGAACCCATCCTTGTTGGATCCTGAAAGAAACATGGTATGTTCGACTTCTCCTTCTAATTTCCTAAGCAAGATAGAGCTCCCTTCAAACCAATTTTCATTGTCATCGCAACCGCACCAAATAGAGCCATCAGAGTTTAAACTTGATGATGTTGAGTATAATAATGACCCTAACTGTTTAAATACAAGTAATGGGTTGGTTGGGGATATTCTATCTGAAGCTCAAACCATGGCTTCTAGTCATCAGAATTTTAAAAAGCGAAGCTACTTCGGCTTGAATGAAGGGCAAGATGAGGCTTTTGAGGGTTGCCAAAGCTTTGATGACTCGGTTCTTAGTTCTCTTTATTGGTCTTCTAGTTCAGGACTAAAACCAAAGGAAGAAGCAACAAACTTAGAGAAATCCATGAATGAGGACTTGTCAACATTGCTCCCTGTAATGCCTTCAACCTTACAATGCCAACAGAATTGGCAGCATAATAATACAACAGAAGTCTCAAATAATGTCCAATCTTCTTGTCTTATGACAGACGACAATTTTGGACTTGATATAAAGCCTGTAGCTTCATTATTTCCTCTCAACAATGCAACTAACCATGATAATAATAATAATAACACAGGATGTTACTCATGGGACAATTTATCTGGGCTATGTTGA 1572 0.4275 MENINKDAENDANSFTAMRGSMEAGDGCCGDSGGATAAGDEVALKKGPWTAAEDAILVDYVTKHGEGNWNAVQRNTKLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIELHAQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDPDRPTISSTPTTPITHLGTNFINNSPTSKFEFLHHQSYLHSPSPHHHHHLNHSPLTSPLHRAPSYSPLSSSSLHTPLSTPISSSPLSFTFHRPAPLLCNPLRFKRYRSTSTVNPTTPTTPTHLSDLDNGFRFPVHLNSSSSSSFSHFFQNPSLLDPERNMVCSTSPSNFLSKIELPSNQFSLSSQPHQIEPSEFKLDDVEYNNDPNCLNTSNGLVGDILSEAQTMASSHQNFKKRSYFGLNEGQDEAFEGCQSFDDSVLSSLYWSSSSGLKPKEEATNLEKSMNEDLSTLLPVMPSTLQCQQNWQHNNTTEVSNNVQSSCLMTDDNFGLDIKPVASLFPLNNATNHDNNNNNTGCYSWDNLSGLC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00232 523 SUPERFAMILY Homeodomain-like 44 140 IPR009057 -
Arst1g00232 523 CDD SANT 48 93 IPR001005 -
Arst1g00232 523 Gene3D - 101 147 - -
Arst1g00232 523 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Arst1g00232 523 SMART sant 45 95 IPR001005 -
Arst1g00232 523 SMART sant 98 146 IPR001005 -
Arst1g00232 523 MobiDBLite consensus disorder prediction 199 234 - -
Arst1g00232 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 93 IPR017930 -
Arst1g00232 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Arst1g00232 523 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Arst1g00232 523 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 474 - -
Arst1g00232 523 MobiDBLite consensus disorder prediction 160 176 - -
Arst1g00232 523 CDD SANT 101 142 IPR001005 -
Arst1g00232 523 FunFam Transcription factor GAMYB 101 147 - -
Arst1g00232 523 FunFam MYB-related transcription factor 45 98 - -
Arst1g00232 523 Pfam Myb-like DNA-binding domain 99 142 IPR001005 -
Arst1g00232 523 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Arst1g00232 523 Gene3D - 45 98 - -
Arst1g00232 523 MobiDBLite consensus disorder prediction 215 234 - -
Arst1g00232 523 MobiDBLite consensus disorder prediction 152 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00232 Arst-Chr1 2154686 2157286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00232 32 155 MYB Transcription Factor Family AT3G11440 77.419 1.49e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g00232 Myb_DNA-binding 3.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00232 - - ahf:112720267 696.812