Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00228 ATGTTTTCCTCATCACTCTCAACTTCCCTTCCTCCAAAACCTTACCTCTCTCACCCACTCTCCCCCTCACTCCACCAACCACCGTTCCCTCACTCTCGCCCTCCGTTTCCTCCTTCCATTCGCTGCGGCATTAGGGAACTCCGAGAAAGAATCGACATCGTTAAGAACACTCACAAGATCACTGAAGCAATGAAGCTCGTCGCGGCTGCCAGGGTCCGACGGGCCCAAGAAGCCGTCCTAAACGGCAGACCCTTCGCCGAAACGCTCGTTGAAGTCTTGCACGACATCAACTGCCGTCTCCGAGACGACGACGTCATCGTCCCCCTAACGGACGTCAGGCCCGTCAACTCCGTCGCCCTCGTTGTCGTCACCGGAGACCGCGGCCTCTGTGGCGGTTTCAATAACGCCGTCTTGAAGAAAGCCGAAGCTCGGATCCAACAGCTACACAAGCTTGGCTTGAATTGCGTTGTGATTAGCGTTGGGAAGAAGGGGAACGCGTTTTTCAGCCGCAAGGGAAGTGTTAGGGTTGATAGGTTCGTTGAATGTGGGAGCTTCCCCACTGTGAAAGAAGCTCAAATCATTGCTGATGATGTGTATTCACTGTTTGTTACAGAGGAGGTTGACAAGGTTGAGATTGTTTACACCAAGTTTGTGTCATTGGTGAAGTTTGATCCTGTGATTCAAACTCTGTTGCCGTTAACGGCTAAAGGCGAGGTTCGCGATGTGAATGGGAACTGCATTGATGCCATTGATGACGAATACTTTAGGTTGACTACAAAGGAAGGGAAGTTGGCAGTGGAGAGGGATGTTGCTGTCAGGGAATTTGCTACGCCGCCGATTATGGAGTTCGAGCAAGATCCGGTTCAGATTCTTGATGCTATGTTGCCTCTGTATTTGAACAGCCAGATCTTGAGGGGTTTGCAGGAATCACTAGCGAGTGAGCTTGCTGCTAGGATGGCTGCAATGTCTAATGCAACCGATAATGCTGTTGAATTGAAGAAGAATCTGTCGGTTGCTTATAATCGTGAACGGCAGGCAAAGATCACAGGGGAGATATTGGAGATTGTGGCCGGAGCTGAGGCACTAATACCAGTTGATTGA 1101 0.5059 MFSSSLSTSLPPKPYLSHPLSPSLHQPPFPHSRPPFPPSIRCGIRELRERIDIVKNTHKITEAMKLVAAARVRRAQEAVLNGRPFAETLVEVLHDINCRLRDDDVIVPLTDVRPVNSVALVVVTGDRGLCGGFNNAVLKKAEARIQQLHKLGLNCVVISVGKKGNAFFSRKGSVRVDRFVECGSFPTVKEAQIIADDVYSLFVTEEVDKVEIVYTKFVSLVKFDPVIQTLLPLTAKGEVRDVNGNCIDAIDDEYFRLTTKEGKLAVERDVAVREFATPPIMEFEQDPVQILDAMLPLYLNSQILRGLQESLASELAARMAAMSNATDNAVELKKNLSVAYNRERQAKITGEILEIVAGAEALIPVD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00228 366 ProSitePatterns ATP synthase gamma subunit signature. 348 361 IPR023632 -
Arst1g00228 366 FunFam ATP synthase gamma chain 108 234 - -
Arst1g00228 366 FunFam ATP synthase gamma chain, chloroplastic 260 362 - -
Arst1g00228 366 CDD F1-ATPase_gamma 44 359 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 Hamap ATP synthase gamma chain [atpG]. 41 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 PRINTS ATP synthase gamma subunit signature 115 134 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 PRINTS ATP synthase gamma subunit signature 340 361 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 PRINTS ATP synthase gamma subunit signature 208 225 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 PRINTS ATP synthase gamma subunit signature 309 328 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 MobiDBLite consensus disorder prediction 1 36 - -
Arst1g00228 366 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 43 362 IPR035968 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 MobiDBLite consensus disorder prediction 15 36 - -
Arst1g00228 366 NCBIfam ATP synthase F1 subunit gamma 44 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 FunFam ATP synthase gamma chain, chloroplastic 42 109 - -
Arst1g00228 366 Gene3D - 107 235 - -
Arst1g00228 366 Pfam ATP synthase 44 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst1g00228 366 Gene3D ATP synthase, gamma subunit, helix hairpin domain 42 104 - -
Arst1g00228 366 Gene3D ATP synthase, gamma subunit, helix hairpin domain 264 362 - -
Arst1g00228 366 PANTHER ATP SYNTHASE GAMMA CHAIN 39 362 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00228 Arst-Chr1 2110028 2111549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00228 13 362 Primary Pumps ATPases AT1G15700 70.822 4.22e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00228 K02115 - qsa:O6P43_013711 489.96