Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00182 ATGGATTCTGAAAACTATGATTTGGATGAGTTTTTGACATCCATTTCCTTTGATTTTTTATATGATTCGAACCCCAACAACCCTTCAGTTTCCATATATGAATTGGATTCTCTGCATGAACCTCAATTGTCACCATCAGATATGGATCATAATAATGGTTTGGTTTCGAAGTGTAACGGTTCTACGAAATGCTTCACTGACCAAGACCCATTTTTTGATCCATTGGAGGAACAAGTGTTATATGAATCAGCATTGACCTCATCGTGCATAACGAACAATTCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGAGTTCTTGGACTTCAATTCAGTGGACGATATTTGCCAATGGTTTGATCCGTCACAAGAGGATAATAACTCAAACACCTTTGTAGAACCAATGCAATGTGATGCTACTTCTTTTTCTTGGAAATCAGTTATGGATAGCTATGAGAATTGTCTATTAGGAAGCAAGGAACCCGAGTCGAATTTGATCGAACCGGCGGCGAGTTCTGCTGATGATACTGCCAGCTTTGAATGCCTATCAGAGTTTGATTTTGATGTGTTGAGAGTCTTATTCTCAGATTCATCAATTGAGGAGATTTTGAATTGTGAAGAAGCAATTTGCAACCCTTTGAATAATGGTTCTAGTTCTGTTTTGGAGTTATCATCAGAAAACAATAAAATGGAGATGATGGAGAACATTTCAATTCCAATGAACTTCACAAAAAATCTTGCTTGGTTTGAGGCTAGAAACAACTTGACCCAGCCGGTTCCGGATTCGGACACAACAAACAAAATCAAGAGAAAGAAAGTGCAGCTAGGCTTGGTTATGGATGATAGTCATAGCATTAAGCTTGGGGAGACCATTCTTTTGCCGCCTCGGAAGAAAGAGGAGCGGAAAAAACTTAGCAAGAAGAAGGACAAGGCAGGGGAGGGTAGTCGGCCGCGGCCGAAAGATCGCCAGAGGATTCAAGACTGCATTCAACAATTGAGAACAATCATCCCTGGCAAGGATGTTAAAGAGTGTAGCATTGATAATTTGTTAGAGTGCTCCATCAGATACATGAGTTTCTTGTCAAGCACTGCACATTATGCAAACAAGCTACAAGAACCAGATAAGCCTAAGGCAAATGGAGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAACATTGTGGAACATGGTCATTTGAAGAGCCACATCAAACATTGTTATGCCCAATTATAGTTGAGGACATGTCTCATCCTGGCCAAATGCTTATAGAGTTGCTTTGTGAGGAGGAAGGGTTCTCTCTTGAGATGGTTGACACAATTAAGGGTCTTGGTTTAAATATACTGAAAGCAAAGATGGAAACAAGGAATAAAAAACTATGGGCACGCTTTATTGTTGAGGCCAATAGACATGTTACAAAAATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGCAGAAAAACTCCTCAGGAACTGGAATGGATTCATCAACTAATAATAACAAGTATTGCAATGTAATGAATGATAGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACTTTTTTATGTCCATGACAGAGGCACTAAGCTTCAGTGGTTGA 1629 0.3941 MDSENYDLDEFLTSISFDFLYDSNPNNPSVSIYELDSLHEPQLSPSDMDHNNGLVSKCNGSTKCFTDQDPFFDPLEEQVLYESALTSSCITNNSMENQHSNQVIMAEEFLDFNSVDDICQWFDPSQEDNNSNTFVEPMQCDATSFSWKSVMDSYENCLLGSKEPESNLIEPAASSADDTASFECLSEFDFDVLRVLFSDSSIEEILNCEEAICNPLNNGSSSVLELSSENNKMEMMENISIPMNFTKNLAWFEARNNLTQPVPDSDTTNKIKRKKVQLGLVMDDSHSIKLGETILLPPRKKEERKKLSKKKDKAGEGSRPRPKDRQRIQDCIQQLRTIIPGKDVKECSIDNLLECSIRYMSFLSSTAHYANKLQEPDKPKANGVVLQESSVEGSKHCGTWSFEEPHQTLLCPIIVEDMSHPGQMLIELLCEEEGFSLEMVDTIKGLGLNILKAKMETRNKKLWARFIVEANRHVTKIDVFWSLLHLVEQKNSSGTGMDSSTNNNKYCNVMNDSSVSRLDKQQQEKESCNFFMSMTEALSFSG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00182 542 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 363 IPR011598 GO:0046983
Arst1g00182 542 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 86 512 IPR043561 GO:0003700|GO:0006355
Arst1g00182 542 MobiDBLite consensus disorder prediction 299 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00182 Arst-Chr1 1663662 1666187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00182 277 494 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 38.991 2.32e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00182 - - adu:110281254 1060.83