Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00176 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGACAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATGCTCCTAAGACTCTTTCATGGACAAAAGAAGATGCATACATACCAAAATATTATCATACTTCTTCTATTGGTCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGTTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTCCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGGTATTTTAAAATAGGATGAAATATTCTCTCTAAATTGTTTGTTGAATAAATTATCATTTATACTCATGAAAAATATAAACGCTAACAAATTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACACACAAAATGACTCACAAACATTTTTCCCTACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGTTATCAACCTTCAAGGCATTGCTATTGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGACATACTGTGACTTCAAACCCCATCAACCCATTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTCTGTCACGACACCTCTCTCAAACCTTCTCAAACTGGCTCTGTATACAATTTCGACCCATGCTCTGATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAAGAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTTTTTTTCAGTGGAAGGACAGCCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATGTCTGGATATACAGTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGTATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1494 0.4177 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENAPKTLSWTKEDAYIPKYYHTSSIGPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNVGRDLFYYFVESPANSSQYNPLVLWLNGGILKXDEIFSLNCLLNKLSFILMKNINANKLANVLFLESPAGVGFSYTQNDSQTFFPTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSVINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIETYCDFKPHQPISSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKPSQTGSVYNFDPCSDVYVQAYLNRPEVQEALHAKPTQWSHCSFFQWKDSPVTVLPLIKKLIDHNINVWIYSGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLVFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00176 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 80 475 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 Pfam Serine carboxypeptidase 164 487 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 Pfam Serine carboxypeptidase 93 136 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 FunFam Carboxypeptidase 352 490 - -
Arst1g00176 497 Gene3D alpha/beta hydrolase 77 337 IPR029058 -
Arst1g00176 497 SUPERFAMILY alpha/beta-Hydrolases 85 490 IPR029058 -
Arst1g00176 497 Gene3D - 394 488 - -
Arst1g00176 497 FunFam Carboxypeptidase 394 488 - -
Arst1g00176 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Arst1g00176 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Arst1g00176 497 Gene3D - 343 384 - -
Arst1g00176 497 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00176 Arst-Chr1 1584678 1591305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00176 362 490 Calmodulin-binding Proteins AT2G22960 30.657 2.41e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00176 K16297 - gmx:100779407 591.652