Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00173 ATGTTGTCTCAGTTGTGGCCTCCCCATATTCACACAGCCTCCTTTCTCTTGCCTGAGCTTCCCCGGCCTCATCATTTTCTTCTGCTGTCGAGCAATGCATGTAGACGTACTCCTACTTTTCACTTTCGATTAGAAAGTAGAAGACGACCAAGGCCAAGACGAGGCAGCAGCATTTGTTGTTGTTGTGGTTCTGCCTCTGAGTGGGAACTTAAGGAAGCAGGTATAGCCGTGTCAACTTTCCTTCAAGGATTAGGGGTGTCAGAGGAGGAGTCCTTATCCATCGCATCCAAGTCACCCTCTTACTCCAACATGTTGGTGGAGAGTGTCAGGGATTTGGACCAACACTCCATGTGGAATTCCGATTCGGCCTCCTTGGGCTTCAGGGAAAAGCTTCTTCACATTGCGTCCCTCAAAGGTGACAATGGAAAACTCCCTTACTTTGAGAGTCTCGGCTTCACTCTTTCTTCATCTATCGCCCTTGCTAGGTATCTCTCCTCTCAGAACCTCCCATCCCTCATGCACAAGGTTGCATCCATCAAGGATCTCTTCTTTTCTCATCAAGCTGATCACCTCCTCATCAACAACATTCGTCGCATGATGCTCCACCTGTCCATTCCAATCGACGATGATCTACAGCATACTCTCTCCTTCTTTGAGAAGCTTGAAGCCAGGCGTGGAGGCTTAAATGTCTTTCTTTCTGACAAAGACACTGCCTTCCGCCATTTGATTGATTCCTTTCCTCGTTTACTTTCACTCTCACTGGATAACCACATCGTTCCTATTATCGATTTTCTCCACAATATTGGAGTTCCCAGAGTTCACATCACAACCATAATACTCTCTTTTCCGCCTATTCTGTTCTGGAATATTCAACTCCTTAAAGCTAGACTCCTCGCCTTGAAACAGATTCATCTGGTGGATAAAGATTATATCAAGTTGTTGAGCAGATATCCTTGGGTTCTATCTACAAGCATTCAAGAGAACTATGAGGAGGTTCATGGATTTTTTCTTTCTGAGAAGGTTAGAAAGATATGTATTGACTCTGCAATCAGAGGCCAACCATACCTATTGGGTTGTTCAACTGGCAAGCTGAAGTCGATGCTGGATCAGTTGGCTGATCTTGGAGTTAAGGGAAATAAGTTAGATAGGGTTATTGCTAGAAGCCCGCAGCTACTATTGCGGAAGCCCAGAGATTTTCTACAGGTTGTTCTGTTCTTTGAAAATATGGGCTTGGATAGAGAAATTGTTGGGAGAATTCTTTCTCGCTGCCCAGAAATTTTCGCTGCCAGCATCAATAAAACTCTTAAGAGGAAGATTGAATTCCTTTCTGGGGTTGGCGTTTCGGAAGCATATCTTCCTGGGGTAATCAGAAAGTATCCGGAATTACTTGTAACGGACACTGATAAAACCATACTACATCGGCTGATGTACCTGATGAAGTTAGGACTTTCGGAGAAAGAGATTGGGTTTATGGTGCGCACGTTTTCTCCGCTCTTCGGGTACAGTATAGAGGAGGTTCTGAGGCCAAAAATAGAATTCTTAGTGAAGTCGATGAAGAGGCCGGTACGAGAAGTTGTTGATTACCCTCGGTATTTTAGCTATTCATTAGAAAAGAAGATAAAGCCAAGATACTTTGTACTCAAGGGAAGGCATATTGAATGTAGCTTAAAGGATATGCTGGGAAAAAATGATGAGGAATTTGCTGCAGAATTTATGGGTGTGGGTCTTGGAGGGATGCTTGACCCTCCTCTCTCTTCTGAGAATGTGTTGTAA 1773 0.4416 MLSQLWPPHIHTASFLLPELPRPHHFLLLSSNACRRTPTFHFRLESRRRPRPRRGSSICCCCGSASEWELKEAGIAVSTFLQGLGVSEEESLSIASKSPSYSNMLVESVRDLDQHSMWNSDSASLGFREKLLHIASLKGDNGKLPYFESLGFTLSSSIALARYLSSQNLPSLMHKVASIKDLFFSHQADHLLINNIRRMMLHLSIPIDDDLQHTLSFFEKLEARRGGLNVFLSDKDTAFRHLIDSFPRLLSLSLDNHIVPIIDFLHNIGVPRVHITTIILSFPPILFWNIQLLKARLLALKQIHLVDKDYIKLLSRYPWVLSTSIQENYEEVHGFFLSEKVRKICIDSAIRGQPYLLGCSTGKLKSMLDQLADLGVKGNKLDRVIARSPQLLLRKPRDFLQVVLFFENMGLDREIVGRILSRCPEIFAASINKTLKRKIEFLSGVGVSEAYLPGVIRKYPELLVTDTDKTILHRLMYLMKLGLSEKEIGFMVRTFSPLFGYSIEEVLRPKIEFLVKSMKRPVREVVDYPRYFSYSLEKKIKPRYFVLKGRHIECSLKDMLGKNDEEFAAEFMGVGLGGMLDPPLSSENVL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00173 590 PANTHER CGI-12 PROTEIN-RELATED 188 370 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 Gene3D Transcription termination factor 3, mitochondrial 346 576 IPR038538 -
Arst1g00173 590 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
Arst1g00173 590 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00173 Arst-Chr1 1556716 1562672 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst1g00173 mTERF 6.8e-91 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00173 K15031 - gmx:100802127 683.715